RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 STRIP1Q5VSL9 837 aa9.56□□□□□ -0.88
TM4SF1-201ENST00000305366 SLC4A10Q6U841 1118 aa9.56□□□□□ -0.88
TM4SF1-201ENST00000305366 LINS1Q8NG48 757 aa9.56□□□□□ -0.88
TM4SF1-201ENST00000305366 ZNF594Q96JF6 807 aaPredicted RBP9.56□□□□□ -0.88
TM4SF1-201ENST00000305366 CHMP5Q9NZZ3 219 aa9.56□□□□□ -0.88
TM4SF1-201ENST00000305366 NF2P35240 595 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 SOX10P56693 466 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 IFIT5Q13325 482 aaKnown RBP9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 HSCBQ8IWL3 235 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 DCTPP1Q9H773 170 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 HDAC9Q9UKV0 1011 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 MED23Q9ULK4 1368 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 LAMB2P55268 1798 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 CSF1RP07333 972 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 CASP7P55210 303 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 LMBR1LQ6UX01 489 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 RPAP2Q8IXW5 612 aaPredicted RBP9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 ANKRD44Q8N8A2 993 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 C1orf115Q9H7X2 142 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 CD209Q9NNX6 404 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 PCDHAC2Q9Y5I4 1007 aa9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 DDX60Q8IY21 1712 aaKnown RBP9.55□□□□□ -0.88
TM4SF1-201ENST00000305366 ANKRD36CQ5JPF3 1778 aa9.54□□□□□ -0.88
TM4SF1-201ENST00000305366 RBM5P52756 815 aaKnown RBP eCLIP9.54□□□□□ -0.88
TM4SF1-201ENST00000305366 PTPN12Q05209 780 aaKnown RBP9.54□□□□□ -0.88
TM4SF1-201ENST00000305366 DLGAP5Q15398 846 aa9.54□□□□□ -0.88
TM4SF1-201ENST00000305366 EPHA10Q5JZY3 1008 aa9.54□□□□□ -0.88
TM4SF1-201ENST00000305366 PLA2G12BQ9BX93 195 aa9.54□□□□□ -0.88
TM4SF1-201ENST00000305366 CNNM1Q9NRU3 951 aa9.54□□□□□ -0.88
TM4SF1-201ENST00000305366 C9orf78Q9NZ63 289 aaPredicted RBP9.54□□□□□ -0.88
TM4SF1-201ENST00000305366 BCCIPQ9P287 314 aaKnown RBP eCLIP9.54□□□□□ -0.88
TM4SF1-201ENST00000305366 CLRN2A0PK11 232 aa9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 DDIT3P35638 169 aa9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 FKBP1BP68106 108 aa9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 FOXO4P98177 505 aa9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 CCDC57Q2TAC2 916 aa9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 BEND3Q5T5X7 828 aa9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 LDHAL6AQ6ZMR3 332 aa9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 ARMC9Q7Z3E5 817 aa9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 FOXD4L1Q9NU39 408 aa9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 SAGE1Q9NXZ1 904 aa9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 ANGEL1Q9UNK9 670 aaKnown RBP9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 PITPNM2Q9BZ72 1349 aa9.53□□□□□ -0.88
TM4SF1-201ENST00000305366 CDC45O75419 566 aa9.52□□□□□ -0.88
TM4SF1-201ENST00000305366 MCM4P33991 863 aa9.52□□□□□ -0.88
TM4SF1-201ENST00000305366 TBC1D9Q6ZT07 1266 aa9.52□□□□□ -0.88
TM4SF1-201ENST00000305366 CERS5Q8N5B7 392 aa9.52□□□□□ -0.88
TM4SF1-201ENST00000305366 VEZTQ9HBM0 779 aa9.52□□□□□ -0.88
TM4SF1-201ENST00000305366 MYO3BQ8WXR4 1341 aa9.52□□□□□ -0.88
TM4SF1-201ENST00000305366 CFAP100Q494V2 611 aa9.52□□□□□ -0.89
TM4SF1-201ENST00000305366 ZNF804AQ7Z570 1209 aa9.52□□□□□ -0.89
TM4SF1-201ENST00000305366 PLEKHM2Q8IWE5 1019 aa9.52□□□□□ -0.89
TM4SF1-201ENST00000305366 ZNF296Q8WUU4 475 aaPredicted RBP9.52□□□□□ -0.89
TM4SF1-201ENST00000305366 KIF2CQ99661 725 aa9.52□□□□□ -0.89
TM4SF1-201ENST00000305366 DEFB129Q9H1M3 183 aa9.52□□□□□ -0.89
TM4SF1-201ENST00000305366 LRRC37AA6NMS7 1700 aa9.51□□□□□ -0.89
TM4SF1-201ENST00000305366 RGS19P49795 217 aa9.51□□□□□ -0.89
TM4SF1-201ENST00000305366 CEP85Q6P2H3 762 aa9.51□□□□□ -0.89
TM4SF1-201ENST00000305366 CTU1Q7Z7A3 348 aaKnown RBP9.51□□□□□ -0.89
TM4SF1-201ENST00000305366 APOBEC3FQ8IUX4 373 aaKnown RBP9.51□□□□□ -0.89
TM4SF1-201ENST00000305366 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
TM4SF1-201ENST00000305366 SLC10A4Q96EP9 437 aa9.51□□□□□ -0.89
TM4SF1-201ENST00000305366 GRM8O00222 908 aa9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 GYG1P46976 350 aa9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 TTC22Q5TAA0 569 aa9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 REM2Q8IYK8 340 aaPredicted RBP9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 IL27Q8NEV9 243 aa9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 PRMT6Q96LA8 375 aaPredicted RBP9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 PUS3Q9BZE2 481 aaKnown RBP9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 SRCIN1Q9C0H9 1055 aa9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 R3HDMLQ9H3Y0 253 aa9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 IQSEC3Q9UPP2 1182 aaPredicted RBP9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 AOX1Q06278 1338 aa9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 MYO1BO43795 1136 aa9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 GSPT1P15170 499 aaKnown RBP9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 L1TD1Q5T7N2 865 aaKnown RBP9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 SUCLG2Q96I99 432 aa9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 CLMNQ96JQ2 1002 aa9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 TRPM7Q96QT4 1865 aa9.5□□□□□ -0.89
TM4SF1-201ENST00000305366 GPR25O00155 361 aa9.49□□□□□ -0.89
TM4SF1-201ENST00000305366 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
TM4SF1-201ENST00000305366 TM4SF4P48230 202 aa9.49□□□□□ -0.89
TM4SF1-201ENST00000305366 CHAF1AQ13111 956 aaPredicted RBP9.49□□□□□ -0.89
TM4SF1-201ENST00000305366 NBPF12Q5TAG4 269 aaPredicted RBP9.49□□□□□ -0.89
TM4SF1-201ENST00000305366 SPRYD7Q5W111 196 aa9.49□□□□□ -0.89
TM4SF1-201ENST00000305366 ZBED3Q96IU2 234 aaPredicted RBP9.49□□□□□ -0.89
TM4SF1-201ENST00000305366 HPS5Q9UPZ3 1129 aa9.49□□□□□ -0.89
TM4SF1-201ENST00000305366 THSD7BQ9C0I4 1608 aa9.49□□□□□ -0.89
TM4SF1-201ENST00000305366 SCN9AQ15858 1988 aa9.48□□□□□ -0.89
TM4SF1-201ENST00000305366 DDX11L8A8MPP1 907 aa9.48□□□□□ -0.89
TM4SF1-201ENST00000305366 HMMRO75330 724 aa9.48□□□□□ -0.89
TM4SF1-201ENST00000305366 NBPF7P0C2Y1 421 aaPredicted RBP9.48□□□□□ -0.89
TM4SF1-201ENST00000305366 IL1R1P14778 569 aa9.48□□□□□ -0.89
TM4SF1-201ENST00000305366 HIBADHP31937 336 aaKnown RBP9.48□□□□□ -0.89
TM4SF1-201ENST00000305366 SREBF2Q12772 1141 aa9.48□□□□□ -0.89
TM4SF1-201ENST00000305366 VPS37DQ86XT2 251 aa9.48□□□□□ -0.89
TM4SF1-201ENST00000305366 TDRD3Q9H7E2 651 aaKnown RBP9.48□□□□□ -0.89
TM4SF1-201ENST00000305366 BRPF3Q9ULD4 1205 aa9.48□□□□□ -0.89
TM4SF1-201ENST00000305366 TTF2Q9UNY4 1162 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms