RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 CDHR2Q9BYE9 1310 aa16.67■□□□□ 0.26
RAB40A-201ENST00000304236 TPM3P06753 285 aa16.67■□□□□ 0.26
RAB40A-201ENST00000304236 KIAA2012Q0VF49 1180 aa16.67■□□□□ 0.26
RAB40A-201ENST00000304236 IFIT5Q13325 482 aaKnown RBP16.67■□□□□ 0.26
RAB40A-201ENST00000304236 FAM173BQ6P4H8 233 aa16.67■□□□□ 0.26
RAB40A-201ENST00000304236 XAGE2Q96GT9 111 aa16.67■□□□□ 0.26
RAB40A-201ENST00000304236 ZNF330Q9Y3S2 320 aaPredicted RBP16.67■□□□□ 0.26
RAB40A-201ENST00000304236 LIG1P18858 919 aa16.66■□□□□ 0.26
RAB40A-201ENST00000304236 IL6STP40189 918 aaPredicted RBP16.66■□□□□ 0.26
RAB40A-201ENST00000304236 BICDL1Q6ZP65 573 aa16.66■□□□□ 0.26
RAB40A-201ENST00000304236 NSUN7Q8NE18 718 aaKnown RBP16.66■□□□□ 0.26
RAB40A-201ENST00000304236 TNMDQ9H2S6 317 aa16.66■□□□□ 0.26
RAB40A-201ENST00000304236 TFIP11Q9UBB9 837 aaKnown RBP16.66■□□□□ 0.26
RAB40A-201ENST00000304236 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.66■□□□□ 0.26
RAB40A-201ENST00000304236 MAP3K15Q6ZN16 1313 aa16.66■□□□□ 0.26
RAB40A-201ENST00000304236 BRCA1P38398 1863 aaKnown RBP16.66■□□□□ 0.26
RAB40A-201ENST00000304236 C9orf131Q5VYM1 1079 aa16.66■□□□□ 0.26
RAB40A-201ENST00000304236 GIGYF2Q6Y7W6 1299 aaKnown RBP16.66■□□□□ 0.26
RAB40A-201ENST00000304236 RBM43Q6ZSC3 357 aaKnown RBP16.66■□□□□ 0.26
RAB40A-201ENST00000304236 FAM200AQ8TCP9 573 aa16.66■□□□□ 0.26
RAB40A-201ENST00000304236 CLSTN2Q9H4D0 955 aa16.66■□□□□ 0.26
RAB40A-201ENST00000304236 KIF3CO14782 793 aa16.65■□□□□ 0.26
RAB40A-201ENST00000304236 FKBP4Q02790 459 aaKnown RBP eCLIP16.65■□□□□ 0.26
RAB40A-201ENST00000304236 DDX11Q96FC9 970 aa16.65■□□□□ 0.26
RAB40A-201ENST00000304236 LRRC2Q9BYS8 371 aa16.65■□□□□ 0.26
RAB40A-201ENST00000304236 TBC1D2BQ9UPU7 963 aa16.65■□□□□ 0.26
RAB40A-201ENST00000304236 M0R2C6 588 aa16.64■□□□□ 0.25
RAB40A-201ENST00000304236 APOBRQ0VD83 1088 aa16.64■□□□□ 0.25
RAB40A-201ENST00000304236 DACT1Q9NYF0 836 aa16.64■□□□□ 0.25
RAB40A-201ENST00000304236 ARFGEF1Q9Y6D6 1849 aa16.64■□□□□ 0.25
RAB40A-201ENST00000304236 MYH15Q9Y2K3 1946 aa16.64■□□□□ 0.25
RAB40A-201ENST00000304236 PTPDC1A2A3K4 754 aa16.64■□□□□ 0.25
RAB40A-201ENST00000304236 CAVIN2O95810 425 aa16.64■□□□□ 0.25
RAB40A-201ENST00000304236 EVCP57679 992 aa16.64■□□□□ 0.25
RAB40A-201ENST00000304236 TYRO3Q06418 890 aa16.64■□□□□ 0.25
RAB40A-201ENST00000304236 IMMTQ16891 758 aaKnown RBP16.64■□□□□ 0.25
RAB40A-201ENST00000304236 APPBP2Q92624 585 aa16.64■□□□□ 0.25
RAB40A-201ENST00000304236 OSBP2Q969R2 916 aa16.64■□□□□ 0.25
RAB40A-201ENST00000304236 ZNF396Q96N95 335 aaPredicted RBP16.64■□□□□ 0.25
RAB40A-201ENST00000304236 TBC1D9BQ66K14 1250 aa16.63■□□□□ 0.25
RAB40A-201ENST00000304236 ZSCAN25Q6NSZ9 544 aa16.63■□□□□ 0.25
RAB40A-201ENST00000304236 BICD2Q8TD16 824 aa16.63■□□□□ 0.25
RAB40A-201ENST00000304236 FAM89AQ96GI7 184 aa16.63■□□□□ 0.25
RAB40A-201ENST00000304236 SALL1Q9NSC2 1324 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 GOLGA6L6A8MZA4 724 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 H0YIN7 160 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 CTDNEP1O95476 244 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 HSPA6P17066 643 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 PDIA3P30101 505 aaKnown RBP16.62■□□□□ 0.25
RAB40A-201ENST00000304236 ADORA1P30542 326 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 WASHC4Q2M389 1173 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 SLFNL1Q499Z3 407 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 C2CD5Q86YS7 1000 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
RAB40A-201ENST00000304236 RCOR1Q9UKL0 485 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 MRVI1Q9Y6F6 885 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 MYH7P12883 1935 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 NRXN2Q9P2S2 1712 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 ATP2B3Q16720 1220 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 TTLL6Q8N841 843 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 PGBD1Q96JS3 809 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.62■□□□□ 0.25
RAB40A-201ENST00000304236 RNF181Q9P0P0 153 aa16.62■□□□□ 0.25
RAB40A-201ENST00000304236 R3HCC1Q9Y3T6 440 aaKnown RBP16.62■□□□□ 0.25
RAB40A-201ENST00000304236 WDR19Q8NEZ3 1342 aa16.61■□□□□ 0.25
RAB40A-201ENST00000304236 ANKRD18BA2A2Z9 1011 aa16.61■□□□□ 0.25
RAB40A-201ENST00000304236 CTAGE5O15320 804 aa16.61■□□□□ 0.25
RAB40A-201ENST00000304236 SASS6Q6UVJ0 657 aa16.61■□□□□ 0.25
RAB40A-201ENST00000304236 NLRP10Q86W26 655 aa16.61■□□□□ 0.25
RAB40A-201ENST00000304236 PIBF1Q8WXW3 757 aa16.61■□□□□ 0.25
RAB40A-201ENST00000304236 RIPOR2Q9Y4F9 1068 aa16.61■□□□□ 0.25
RAB40A-201ENST00000304236 ANKRD36CQ5JPF3 1778 aa16.61■□□□□ 0.25
RAB40A-201ENST00000304236 CARMIL3Q8ND23 1372 aa16.61■□□□□ 0.25
RAB40A-201ENST00000304236 DHX16O60231 1041 aaKnown RBP16.6■□□□□ 0.25
RAB40A-201ENST00000304236 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
RAB40A-201ENST00000304236 CAMK4Q16566 473 aa16.6■□□□□ 0.25
RAB40A-201ENST00000304236 METTL24Q5JXM2 366 aa16.6■□□□□ 0.25
RAB40A-201ENST00000304236 SETDB2Q96T68 719 aa16.6■□□□□ 0.25
RAB40A-201ENST00000304236 MYH3P11055 1940 aa16.6■□□□□ 0.25
RAB40A-201ENST00000304236 TOMM70O94826 608 aa16.6■□□□□ 0.25
RAB40A-201ENST00000304236 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
RAB40A-201ENST00000304236 ADD1P35611 737 aaKnown RBP16.6■□□□□ 0.25
RAB40A-201ENST00000304236 PDE6BP35913 854 aa16.6■□□□□ 0.25
RAB40A-201ENST00000304236 ZAP70P43403 619 aa16.6■□□□□ 0.25
RAB40A-201ENST00000304236 CCT2P78371 535 aaKnown RBP16.6■□□□□ 0.25
RAB40A-201ENST00000304236 DZIP3Q86Y13 1208 aaKnown RBP16.6■□□□□ 0.25
RAB40A-201ENST00000304236 RGS22Q8NE09 1264 aa16.6■□□□□ 0.25
RAB40A-201ENST00000304236 TTLL11Q8NHH1 800 aa16.6■□□□□ 0.25
RAB40A-201ENST00000304236 BRIP1Q9BX63 1249 aa16.6■□□□□ 0.25
RAB40A-201ENST00000304236 RIC1Q4ADV7 1423 aa16.59■□□□□ 0.25
RAB40A-201ENST00000304236 RRP9O43818 475 aaKnown RBP16.59■□□□□ 0.25
RAB40A-201ENST00000304236 LDHAL6AQ6ZMR3 332 aa16.59■□□□□ 0.25
RAB40A-201ENST00000304236 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
RAB40A-201ENST00000304236 NMRK2Q9NPI5 230 aa16.59■□□□□ 0.25
RAB40A-201ENST00000304236 ERVV-1B6SEH8 477 aa16.58■□□□□ 0.25
RAB40A-201ENST00000304236 NPHP1O15259 732 aa16.58■□□□□ 0.25
RAB40A-201ENST00000304236 NR1I2O75469 434 aa16.58■□□□□ 0.25
RAB40A-201ENST00000304236 FGAP02671 866 aa16.58■□□□□ 0.25
RAB40A-201ENST00000304236 ITGA6P23229 1130 aa16.58■□□□□ 0.25
RAB40A-201ENST00000304236 CTSWP56202 376 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms