RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 FAM160A1Q05DH4 1040 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 C8orf74Q6P047 294 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 PPP1R21Q6ZMI0 780 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 RUFY4Q6ZNE9 571 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 GDPD2Q9HCC8 539 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 GOLGA6AQ9NYA3 693 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 UQCRFS1P1P0C7P4 283 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 KRT5P13647 590 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 KRT2P35908 639 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 BIRC2Q13490 618 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 GIMAP6Q6P9H5 292 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 TRIM35Q9UPQ4 493 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 CCT6AP40227 531 aaKnown RBP9.77□□□□□ -0.85
NIPBL-201ENST00000282516 HHATQ5VTY9 493 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 KRT79Q5XKE5 535 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 PPP4R1Q8TF05 950 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 SMTNP53814 917 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 PLS1Q14651 629 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 CYB5RLQ6IPT4 315 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 LZTFL1Q9NQ48 299 aa9.77□□□□□ -0.85
NIPBL-201ENST00000282516 KLF18A0A0U1RQI7 1052 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 PPP1R42Q7Z4L9 355 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 OSCARQ8IYS5 282 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 MUM1L1Q5H9M0 696 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 SDCCAG3Q96C92 435 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 NAP1L4Q99733 375 aaKnown RBP9.76□□□□□ -0.85
NIPBL-201ENST00000282516 SLC52A1Q9NWF4 448 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 CNPY2Q9Y2B0 182 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 LUC7L3O95232 432 aaKnown RBP9.76□□□□□ -0.85
NIPBL-201ENST00000282516 TYRO3Q06418 890 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 FAM212AQ96EL1 285 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 THEGQ9P2T0 379 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 PTCD1O75127 700 aaKnown RBP9.76□□□□□ -0.85
NIPBL-201ENST00000282516 GNA11P29992 359 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 TEX13AQ9BXU3 409 aaPredicted RBP9.76□□□□□ -0.85
NIPBL-201ENST00000282516 GON4LQ3T8J9 2241 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 GOLGA6BA6NDN3 693 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 TTC22Q5TAA0 569 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 BRAPQ7Z569 592 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 PROCA1Q8NCQ7 364 aaPredicted RBP9.76□□□□□ -0.85
NIPBL-201ENST00000282516 PDCD2Q16342 344 aaPredicted RBP9.76□□□□□ -0.85
NIPBL-201ENST00000282516 ZNF804AQ7Z570 1209 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 FAN1Q9Y2M0 1017 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 TXNDC9O14530 226 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 COG7P83436 770 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 CCDC152Q4G0S7 254 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 RNF34Q969K3 372 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 TTC21BQ7Z4L5 1316 aa9.76□□□□□ -0.85
NIPBL-201ENST00000282516 SLFN5Q08AF3 891 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 NSMCE1Q8WV22 266 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 NAPGQ99747 312 aaPredicted RBP9.75□□□□□ -0.85
NIPBL-201ENST00000282516 SMIM24O75264 130 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 BIRC3Q13489 604 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 DCAF17Q5H9S7 520 aaPredicted RBP9.75□□□□□ -0.85
NIPBL-201ENST00000282516 MUM1Q2TAK8 710 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 UTP14CQ5TAP6 766 aaKnown RBP9.75□□□□□ -0.85
NIPBL-201ENST00000282516 SSH1Q8WYL5 1049 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 CCDC8Q9H0W5 538 aaPredicted RBP9.75□□□□□ -0.85
NIPBL-201ENST00000282516 DENND2CQ68D51 928 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 KRBA2Q6ZNG9 492 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 ANKLE2Q86XL3 938 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 TRIM6Q9C030 488 aaPredicted RBP9.75□□□□□ -0.85
NIPBL-201ENST00000282516 SPTLC2O15270 562 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 CCDC186Q7Z3E2 898 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 HSP90AA4PQ58FG1 418 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 FGD5Q6ZNL6 1462 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 RFX1P22670 979 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 PPP1R2P41236 205 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 VSIG1Q86XK7 387 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 GTF3C6Q969F1 213 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 SLC12A5Q9H2X9 1139 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 CFAP65Q6ZU64 1925 aaKnown RBP9.75□□□□□ -0.85
NIPBL-201ENST00000282516 AKR1B15C9JRZ8 316 aaPredicted RBP9.75□□□□□ -0.85
NIPBL-201ENST00000282516 DAPK3O43293 454 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 GNAT2P19087 354 aa9.75□□□□□ -0.85
NIPBL-201ENST00000282516 RAPGEF1Q13905 1077 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 NBPF5PQ86XG9 351 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-201ENST00000282516 MIS18AQ9NYP9 233 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 RBBP5Q15291 538 aaKnown RBP9.74□□□□□ -0.85
NIPBL-201ENST00000282516 SEPT8Q92599 483 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 P3H4Q92791 437 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 DIXDC1Q155Q3 683 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 TMCO4Q5TGY1 634 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 NCAPD3P42695 1498 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 LMOD1P29536 600 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-201ENST00000282516 CLCN1P35523 988 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 TNNI2P48788 182 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 SLC12A2P55011 1212 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 KARSQ15046 597 aaKnown RBP9.74□□□□□ -0.85
NIPBL-201ENST00000282516 SLC4A8Q2Y0W8 1093 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 SYCE1Q8N0S2 351 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 BAG5Q9UL15 447 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 KIF14Q15058 1648 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 ORC6Q9Y5N6 252 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 STK24Q9Y6E0 443 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 ZBTB24O43167 697 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-201ENST00000282516 DBN1Q16643 649 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms