RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 A0A1B0GUA9 196 aa17.09■□□□□ 0.33
CASC3-201ENST00000264645 CCDC151A5D8V7 595 aa17.09■□□□□ 0.33
CASC3-201ENST00000264645 CYP2C19P33261 490 aa17.09■□□□□ 0.33
CASC3-201ENST00000264645 TUBB2AQ13885 445 aa17.08■□□□□ 0.33
CASC3-201ENST00000264645 ZNF827Q17R98 1081 aa17.08■□□□□ 0.33
CASC3-201ENST00000264645 MYSM1Q5VVJ2 828 aa17.08■□□□□ 0.33
CASC3-201ENST00000264645 COPS6Q7L5N1 327 aa17.08■□□□□ 0.33
CASC3-201ENST00000264645 RGS22Q8NE09 1264 aa17.08■□□□□ 0.33
CASC3-201ENST00000264645 PSMB7Q99436 277 aa17.08■□□□□ 0.33
CASC3-201ENST00000264645 TUBB2BQ9BVA1 445 aa17.08■□□□□ 0.33
CASC3-201ENST00000264645 INCENPQ9NQS7 918 aa17.08■□□□□ 0.33
CASC3-201ENST00000264645 KIAA0556O60303 1618 aa17.08■□□□□ 0.32
CASC3-201ENST00000264645 UBA7P41226 1012 aa17.08■□□□□ 0.32
CASC3-201ENST00000264645 ANKRD18AQ8IVF6 992 aa17.08■□□□□ 0.32
CASC3-201ENST00000264645 PHLPP2Q6ZVD8 1323 aa17.08■□□□□ 0.32
CASC3-201ENST00000264645 CLNS1AP54105 237 aaKnown RBP17.08■□□□□ 0.32
CASC3-201ENST00000264645 FAM71BQ8TC56 605 aa17.08■□□□□ 0.32
CASC3-201ENST00000264645 MAPK8IP1Q9UQF2 711 aa17.08■□□□□ 0.32
CASC3-201ENST00000264645 SBNO2Q9Y2G9 1366 aa17.08■□□□□ 0.32
CASC3-201ENST00000264645 RANBP6O60518 1105 aaKnown RBP17.07■□□□□ 0.32
CASC3-201ENST00000264645 NLRP5P59047 1200 aa17.07■□□□□ 0.32
CASC3-201ENST00000264645 ANKRD13DQ6ZTN6 518 aa17.07■□□□□ 0.32
CASC3-201ENST00000264645 SRGAP1Q7Z6B7 1085 aa17.07■□□□□ 0.32
CASC3-201ENST00000264645 PRDM15P57071 1507 aaPredicted RBP17.07■□□□□ 0.32
CASC3-201ENST00000264645 KDM5AP29375 1690 aaKnown RBP17.07■□□□□ 0.32
CASC3-201ENST00000264645 ATP1A3P13637 1013 aa17.07■□□□□ 0.32
CASC3-201ENST00000264645 GNGT1P63211 74 aa17.07■□□□□ 0.32
CASC3-201ENST00000264645 XAGE3Q8WTP9 111 aa17.07■□□□□ 0.32
CASC3-201ENST00000264645 DBNDD2Q9BQY9 259 aa17.07■□□□□ 0.32
CASC3-201ENST00000264645 TMEM51Q9NW97 253 aa17.07■□□□□ 0.32
CASC3-201ENST00000264645 MLKLQ8NB16 471 aa17.07■□□□□ 0.32
CASC3-201ENST00000264645 PRPF4BQ13523 1007 aaKnown RBP17.06■□□□□ 0.32
CASC3-201ENST00000264645 TTC19Q6DKK2 380 aaPredicted RBP17.06■□□□□ 0.32
CASC3-201ENST00000264645 SEC62Q99442 399 aaKnown RBP17.06■□□□□ 0.32
CASC3-201ENST00000264645 NLRP1Q9C000 1473 aa17.06■□□□□ 0.32
CASC3-201ENST00000264645 TRIM75PA6NK02 468 aa17.06■□□□□ 0.32
CASC3-201ENST00000264645 CC2D1AQ6P1N0 951 aaPredicted RBP17.06■□□□□ 0.32
CASC3-201ENST00000264645 ARFGAP2Q8N6H7 521 aa17.06■□□□□ 0.32
CASC3-201ENST00000264645 PGBD1Q96JS3 809 aa17.06■□□□□ 0.32
CASC3-201ENST00000264645 PLA2R1Q13018 1463 aa17.06■□□□□ 0.32
CASC3-201ENST00000264645 MAP4K1Q92918 833 aa17.06■□□□□ 0.32
CASC3-201ENST00000264645 EAF2Q96CJ1 260 aaPredicted RBP17.06■□□□□ 0.32
CASC3-201ENST00000264645 CDC23Q9UJX2 597 aa17.06■□□□□ 0.32
CASC3-201ENST00000264645 TIMM10P62072 90 aa17.06■□□□□ 0.32
CASC3-201ENST00000264645 ST5P78524 1137 aa17.06■□□□□ 0.32
CASC3-201ENST00000264645 SF3A3Q12874 501 aaKnown RBP eCLIP17.06■□□□□ 0.325e-6■■□□□ 14.3
CASC3-201ENST00000264645 MED4Q9NPJ6 270 aa17.06■□□□□ 0.32
CASC3-201ENST00000264645 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
CASC3-201ENST00000264645 ZBTB3Q9H5J0 574 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 FEZ2Q9UHY8 353 aaPredicted RBP17.05■□□□□ 0.32
CASC3-201ENST00000264645 NPATQ14207 1427 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 CLGNO14967 610 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 RBM6P78332 1123 aaKnown RBP17.05■□□□□ 0.32
CASC3-201ENST00000264645 SCRN1Q12765 414 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 KIF6Q6ZMV9 814 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 TMTC1Q8IUR5 882 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 MMRN2Q9H8L6 949 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 STX10O60499 249 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 ATP1A2P50993 1020 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 SARM1Q6SZW1 724 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 RCOR1Q9UKL0 485 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 CLIC4Q9Y696 253 aa17.05■□□□□ 0.32
CASC3-201ENST00000264645 KIAA0232Q92628 1395 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 ZNF853P0CG23 659 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 PPFIA1Q13136 1202 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 WWC2Q6AWC2 1192 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 CYP26C1Q6V0L0 522 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 RSRC1Q96IZ7 334 aaKnown RBP17.04■□□□□ 0.32
CASC3-201ENST00000264645 BMP2KQ9NSY1 1161 aaPredicted RBP17.04■□□□□ 0.32
CASC3-201ENST00000264645 DISP1Q96F81 1524 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 PLCH2O75038 1416 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 MAGEA9P43362 315 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 STAMQ92783 540 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 TTC21AQ8NDW8 1320 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 EIF3CLB5ME19 914 aaKnown RBP17.04■□□□□ 0.32
CASC3-201ENST00000264645 ZMYND10O75800 440 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 SEPT7Q16181 437 aaKnown RBP17.04■□□□□ 0.32
CASC3-201ENST00000264645 RTN1Q16799 776 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 MFSD6Q6ZSS7 791 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 GPIHBP1Q8IV16 184 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 EFCAB13Q8IY85 973 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 PHKBQ93100 1093 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 EIF3CQ99613 913 aaKnown RBP17.04■□□□□ 0.32
CASC3-201ENST00000264645 AK9Q5TCS8 1911 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 ABCC10Q5T3U5 1492 aa17.04■□□□□ 0.32
CASC3-201ENST00000264645 PSMA7O14818 248 aa17.03■□□□□ 0.32
CASC3-201ENST00000264645 RNF40O75150 1001 aa17.03■□□□□ 0.32
CASC3-201ENST00000264645 CCDC172P0C7W6 258 aa17.03■□□□□ 0.32
CASC3-201ENST00000264645 ARHGAP25P42331 645 aa17.03■□□□□ 0.32
CASC3-201ENST00000264645 RNASE9P60153 205 aaKnown RBP17.03■□□□□ 0.32
CASC3-201ENST00000264645 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
CASC3-201ENST00000264645 POSTNQ15063 836 aa17.03■□□□□ 0.32
CASC3-201ENST00000264645 GNL3LQ9NVN8 582 aaKnown RBP17.03■□□□□ 0.32
CASC3-201ENST00000264645 RNF113AO15541 343 aaKnown RBP17.03■□□□□ 0.32
CASC3-201ENST00000264645 NEBLO76041 1014 aa17.03■□□□□ 0.32
CASC3-201ENST00000264645 IFIT5Q13325 482 aaKnown RBP17.03■□□□□ 0.32
CASC3-201ENST00000264645 ZNF526Q8TF50 670 aaPredicted RBP17.03■□□□□ 0.32
CASC3-201ENST00000264645 A0A087WUV0 522 aaPredicted RBP17.03■□□□□ 0.32
CASC3-201ENST00000264645 CCDC194A0A1B0GVG4 234 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms