RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 PACS2Q86VP3 889 aa23.53■■□□□ 1.36
RARA-201ENST00000254066 EPC1Q9H2F5 836 aa23.53■■□□□ 1.36
RARA-201ENST00000254066 BEND6Q5SZJ8 279 aaPredicted RBP23.53■■□□□ 1.36
RARA-201ENST00000254066 VPS18Q9P253 973 aa23.53■■□□□ 1.36
RARA-201ENST00000254066 TOP1P11387 765 aaKnown RBP23.52■■□□□ 1.36
RARA-201ENST00000254066 SWT1Q5T5J6 900 aaKnown RBP23.52■■□□□ 1.36
RARA-201ENST00000254066 SALL1Q9NSC2 1324 aa23.52■■□□□ 1.36
RARA-201ENST00000254066 PTPDC1A2A3K4 754 aa23.52■■□□□ 1.36
RARA-201ENST00000254066 LINC00301Q8NCQ3 95 aa23.52■■□□□ 1.36
RARA-201ENST00000254066 MSANTD4Q8NCY6 345 aa23.52■■□□□ 1.36
RARA-201ENST00000254066 SRGAP1Q7Z6B7 1085 aa23.51■■□□□ 1.35
RARA-201ENST00000254066 EFCAB13Q8IY85 973 aa23.51■■□□□ 1.35
RARA-201ENST00000254066 ERCC4Q92889 916 aaPredicted RBP23.51■■□□□ 1.35
RARA-201ENST00000254066 WDR24Q96S15 920 aa23.51■■□□□ 1.35
RARA-201ENST00000254066 HSD3B7Q9H2F3 369 aa23.51■■□□□ 1.35
RARA-201ENST00000254066 A0A1B0GVL5 298 aa23.51■■□□□ 1.35
RARA-201ENST00000254066 LMOD1P29536 600 aaPredicted RBP23.51■■□□□ 1.35
RARA-201ENST00000254066 CEP112Q8N8E3 955 aa23.51■■□□□ 1.35
RARA-201ENST00000254066 FAM71BQ8TC56 605 aa23.51■■□□□ 1.35
RARA-201ENST00000254066 NHSL1Q5SYE7 1610 aa23.51■■□□□ 1.35
RARA-201ENST00000254066 MYL5Q02045 173 aa23.5■■□□□ 1.35
RARA-201ENST00000254066 FBXW7Q969H0 707 aa23.5■■□□□ 1.35
RARA-201ENST00000254066 AGXT2Q9BYV1 514 aa23.5■■□□□ 1.35
RARA-201ENST00000254066 FAM107BQ9H098 131 aa23.5■■□□□ 1.35
RARA-201ENST00000254066 GBP3Q9H0R5 595 aa23.5■■□□□ 1.35
RARA-201ENST00000254066 POLR3EQ9NVU0 708 aa23.5■■□□□ 1.35
RARA-201ENST00000254066 SERPINC1P01008 464 aa23.5■■□□□ 1.35
RARA-201ENST00000254066 ZNF589Q86UQ0 364 aaPredicted RBP23.5■■□□□ 1.35
RARA-201ENST00000254066 ACBD3Q9H3P7 528 aa23.5■■□□□ 1.35
RARA-201ENST00000254066 PDE11AQ9HCR9 933 aa23.5■■□□□ 1.35
RARA-201ENST00000254066 L1RE1Q9UN81 338 aa23.5■■□□□ 1.35
RARA-201ENST00000254066 CTDNEP1O95476 244 aa23.49■■□□□ 1.35
RARA-201ENST00000254066 BAG1Q99933 345 aaPredicted RBP23.49■■□□□ 1.35
RARA-201ENST00000254066 TUBE1Q9UJT0 475 aa23.49■■□□□ 1.35
RARA-201ENST00000254066 C1orf167Q5SNV9 1468 aa23.49■■□□□ 1.35
RARA-201ENST00000254066 CHMP4BP1P59074 171 aa23.49■■□□□ 1.35
RARA-201ENST00000254066 TBX2Q13207 712 aaPredicted RBP23.49■■□□□ 1.35
RARA-201ENST00000254066 PI4KAP2A4QPH2 592 aa23.48■■□□□ 1.35
RARA-201ENST00000254066 ZNF202O95125 648 aa23.48■■□□□ 1.35
RARA-201ENST00000254066 CFAP100Q494V2 611 aa23.48■■□□□ 1.35
RARA-201ENST00000254066 PI4KAP1Q8N8J0 262 aa23.48■■□□□ 1.35
RARA-201ENST00000254066 FMNL2Q96PY5 1086 aa23.48■■□□□ 1.35
RARA-201ENST00000254066 EYA1Q99502 592 aa23.48■■□□□ 1.35
RARA-201ENST00000254066 MED4Q9NPJ6 270 aa23.48■■□□□ 1.35
RARA-201ENST00000254066 SF3A1Q15459 793 aaKnown RBP23.48■■□□□ 1.35
RARA-201ENST00000254066 EAF2Q96CJ1 260 aaPredicted RBP23.48■■□□□ 1.35
RARA-201ENST00000254066 PRR36Q9H6K5 1346 aa23.48■■□□□ 1.35
RARA-201ENST00000254066 USP6P35125 1406 aa23.47■■□□□ 1.35
RARA-201ENST00000254066 PLEKHG3A1L390 1219 aa23.47■■□□□ 1.35
RARA-201ENST00000254066 CUTAO60888 179 aa23.47■■□□□ 1.35
RARA-201ENST00000254066 STK38Q15208 465 aa23.47■■□□□ 1.35
RARA-201ENST00000254066 FAM43BQ6ZT52 329 aaPredicted RBP23.47■■□□□ 1.35
RARA-201ENST00000254066 DHX32Q7L7V1 743 aaKnown RBP23.47■■□□□ 1.35
RARA-201ENST00000254066 IL17REQ8NFR9 667 aa23.47■■□□□ 1.35
RARA-201ENST00000254066 DHX58Q96C10 678 aa23.47■■□□□ 1.35
RARA-201ENST00000254066 CEP89Q96ST8 783 aa23.47■■□□□ 1.35
RARA-201ENST00000254066 ZBTB9Q96C00 473 aa23.47■■□□□ 1.35
RARA-201ENST00000254066 TOPAZ1Q8N9V7 1692 aa23.46■■□□□ 1.35
RARA-201ENST00000254066 SASH1O94885 1247 aa23.46■■□□□ 1.35
RARA-201ENST00000254066 ATP1A3P13637 1013 aa23.46■■□□□ 1.35
RARA-201ENST00000254066 CMA1P23946 247 aa23.46■■□□□ 1.35
RARA-201ENST00000254066 G3BP1Q13283 466 aaKnown RBP eCLIP23.46■■□□□ 1.35
RARA-201ENST00000254066 HSP90B2PQ58FF3 399 aa23.46■■□□□ 1.35
RARA-201ENST00000254066 CCDC91Q7Z6B0 441 aa23.46■■□□□ 1.35
RARA-201ENST00000254066 ANKZF1Q9H8Y5 726 aa23.46■■□□□ 1.35
RARA-201ENST00000254066 PPFIA4O75335 1185 aa23.45■■□□□ 1.35
RARA-201ENST00000254066 LRRC59Q96AG4 307 aaKnown RBP23.45■■□□□ 1.35
RARA-201ENST00000254066 ZNF274Q96GC6 653 aaPredicted RBP23.45■■□□□ 1.35
RARA-201ENST00000254066 MRC1P22897 1456 aa23.45■■□□□ 1.34
RARA-201ENST00000254066 SPTLC2O15270 562 aa23.45■■□□□ 1.34
RARA-201ENST00000254066 MMS22LQ6ZRQ5 1243 aa23.45■■□□□ 1.34
RARA-201ENST00000254066 EGFL6Q8IUX8 553 aa23.45■■□□□ 1.34
RARA-201ENST00000254066 DPF2Q92785 391 aa23.45■■□□□ 1.34
RARA-201ENST00000254066 LOC102724159A0A0B4J2E5 919 aa23.44■■□□□ 1.34
RARA-201ENST00000254066 MCM6Q14566 821 aa23.44■■□□□ 1.34
RARA-201ENST00000254066 PWP2Q15269 919 aaKnown RBP23.44■■□□□ 1.34
RARA-201ENST00000254066 LRRC31Q6UY01 552 aa23.44■■□□□ 1.34
RARA-201ENST00000254066 BRAPQ7Z569 592 aa23.44■■□□□ 1.34
RARA-201ENST00000254066 FAM177A1Q8N128 213 aaPredicted RBP23.44■■□□□ 1.34
RARA-201ENST00000254066 BOLA2Q9H3K6 86 aa23.44■■□□□ 1.34
RARA-201ENST00000254066 A0A087WUV0 522 aaPredicted RBP23.44■■□□□ 1.34
RARA-201ENST00000254066 CYP21A2P08686 494 aa23.44■■□□□ 1.34
RARA-201ENST00000254066 CDC23Q9UJX2 597 aa23.44■■□□□ 1.34
RARA-201ENST00000254066 FAN1Q9Y2M0 1017 aa23.44■■□□□ 1.34
RARA-201ENST00000254066 BIN1O00499 593 aa23.43■■□□□ 1.34
RARA-201ENST00000254066 MCTP2Q6DN12 878 aa23.43■■□□□ 1.34
RARA-201ENST00000254066 CCDC12Q8WUD4 166 aaPredicted RBP23.43■■□□□ 1.34
RARA-201ENST00000254066 RGS17Q9UGC6 210 aaPredicted RBP23.43■■□□□ 1.34
RARA-201ENST00000254066 PA2G4Q9UQ80 394 aaKnown RBP23.43■■□□□ 1.34
RARA-201ENST00000254066 EIF5P55010 431 aaKnown RBP23.43■■□□□ 1.34
RARA-201ENST00000254066 SIL1Q9H173 461 aa23.43■■□□□ 1.34
RARA-201ENST00000254066 C9orf78Q9NZ63 289 aaPredicted RBP23.43■■□□□ 1.34
RARA-201ENST00000254066 AKAP2Q9Y2D5 859 aa23.43■■□□□ 1.34
RARA-201ENST00000254066 CARMIL3Q8ND23 1372 aa23.43■■□□□ 1.34
RARA-201ENST00000254066 ACEP12821 1306 aa23.42■■□□□ 1.34
RARA-201ENST00000254066 NBPF20Q3BBV1 942 aa23.42■■□□□ 1.34
RARA-201ENST00000254066 CCDC8Q9H0W5 538 aaPredicted RBP23.42■■□□□ 1.34
RARA-201ENST00000254066 GSCP56915 257 aaPredicted RBP23.41■■□□□ 1.34
RARA-201ENST00000254066 EXOSC10Q01780 885 aaKnown RBP23.41■■□□□ 1.34
RARA-201ENST00000254066 DNAJC21Q5F1R6 531 aaKnown RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms