RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MROH5Q6ZUA9 1318 aa18.46■□□□□ 0.55
LRFN1-201ENST00000248668 FGFR2P21802 821 aa18.46■□□□□ 0.55
LRFN1-201ENST00000248668 TYRO3Q06418 890 aa18.46■□□□□ 0.55
LRFN1-201ENST00000248668 CCDC152Q4G0S7 254 aa18.46■□□□□ 0.55
LRFN1-201ENST00000248668 LUZP1Q86V48 1076 aa18.46■□□□□ 0.55
LRFN1-201ENST00000248668 FBXW7Q969H0 707 aa18.46■□□□□ 0.55
LRFN1-201ENST00000248668 AIFM3Q96NN9 605 aa18.46■□□□□ 0.55
LRFN1-201ENST00000248668 ORC3Q9UBD5 711 aaPredicted RBP18.46■□□□□ 0.55
LRFN1-201ENST00000248668 HPS5Q9UPZ3 1129 aa18.46■□□□□ 0.55
LRFN1-201ENST00000248668 ARID4AP29374 1257 aaPredicted RBP18.46■□□□□ 0.55
LRFN1-201ENST00000248668 RRP12Q5JTH9 1297 aaKnown RBP18.46■□□□□ 0.55
LRFN1-201ENST00000248668 ERCC4Q92889 916 aaPredicted RBP18.46■□□□□ 0.55
LRFN1-201ENST00000248668 R3HCC1Q9Y3T6 440 aaKnown RBP18.46■□□□□ 0.55
LRFN1-201ENST00000248668 SPATA31A5Q5VU36 1347 aa18.46■□□□□ 0.55
LRFN1-201ENST00000248668 SPATA31A7Q8IWB4 1347 aa18.46■□□□□ 0.55
LRFN1-201ENST00000248668 UQCRFS1P1P0C7P4 283 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 ADD1P35611 737 aaKnown RBP18.45■□□□□ 0.54
LRFN1-201ENST00000248668 MICU3Q86XE3 530 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 SPC24Q8NBT2 197 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 CDCA7Q9BWT1 371 aaPredicted RBP18.45■□□□□ 0.54
LRFN1-201ENST00000248668 CFAP45Q9UL16 551 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 ZKSCAN5Q9Y2L8 839 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 KIF3AQ9Y496 699 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 AKAP11Q9UKA4 1901 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 NWD2Q9ULI1 1742 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 ABCF2Q9UG63 623 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 SALL1Q9NSC2 1324 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 NTSR2O95665 410 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 CHRNDQ07001 517 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 NAA16Q6N069 864 aaPredicted RBP18.45■□□□□ 0.54
LRFN1-201ENST00000248668 ILDR1Q86SU0 546 aaPredicted RBP18.45■□□□□ 0.54
LRFN1-201ENST00000248668 TTC12Q9H892 705 aaPredicted RBP18.45■□□□□ 0.54
LRFN1-201ENST00000248668 NEDD4P46934 1319 aa18.45■□□□□ 0.54
LRFN1-201ENST00000248668 MYH3P11055 1940 aa18.44■□□□□ 0.54
LRFN1-201ENST00000248668 GTF2E1P29083 439 aaPredicted RBP18.44■□□□□ 0.54
LRFN1-201ENST00000248668 ME1P48163 572 aa18.44■□□□□ 0.54
LRFN1-201ENST00000248668 ANO6Q4KMQ2 910 aa18.44■□□□□ 0.54
LRFN1-201ENST00000248668 C8orf76Q96K31 380 aa18.44■□□□□ 0.54
LRFN1-201ENST00000248668 MRVI1Q9Y6F6 885 aa18.44■□□□□ 0.54
LRFN1-201ENST00000248668 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.44■□□□□ 0.54
LRFN1-201ENST00000248668 MYH14Q7Z406 1995 aaKnown RBP18.44■□□□□ 0.54
LRFN1-201ENST00000248668 UBE3CQ15386 1083 aa18.44■□□□□ 0.54
LRFN1-201ENST00000248668 ERFEQ4G0M1 354 aa18.44■□□□□ 0.54
LRFN1-201ENST00000248668 STRBPQ96SI9 672 aaKnown RBP18.44■□□□□ 0.54
LRFN1-201ENST00000248668 TCRBV5S4A2TA0A5A2 114 aa18.44■□□□□ 0.54
LRFN1-201ENST00000248668 NFXL1Q6ZNB6 911 aa18.44■□□□□ 0.54
LRFN1-201ENST00000248668 CCAR1Q8IX12 1150 aaKnown RBP18.44■□□□□ 0.54
LRFN1-201ENST00000248668 LINC00116Q8NCU8 138 aa18.44■□□□□ 0.54
LRFN1-201ENST00000248668 EPB41L4AQ9HCS5 686 aaPredicted RBP18.44■□□□□ 0.54
LRFN1-201ENST00000248668 MAP3K12Q12852 859 aa18.43■□□□□ 0.54
LRFN1-201ENST00000248668 PHKBQ93100 1093 aa18.43■□□□□ 0.54
LRFN1-201ENST00000248668 ZKSCAN3Q9BRR0 538 aa18.43■□□□□ 0.54
LRFN1-201ENST00000248668 NAPBQ9H115 298 aa18.43■□□□□ 0.54
LRFN1-201ENST00000248668 LRP2BPQ9P2M1 347 aa18.43■□□□□ 0.54
LRFN1-201ENST00000248668 SPEF2Q9C093 1822 aa18.43■□□□□ 0.54
LRFN1-201ENST00000248668 GYG1P46976 350 aa18.43■□□□□ 0.54
LRFN1-201ENST00000248668 C17orf53Q8N3J3 647 aaPredicted RBP18.43■□□□□ 0.54
LRFN1-201ENST00000248668 NGLY1Q96IV0 654 aa18.43■□□□□ 0.54
LRFN1-201ENST00000248668 GOLPH3LQ9H4A5 285 aa18.43■□□□□ 0.54
LRFN1-201ENST00000248668 THRAP3Q9Y2W1 955 aaKnown RBP18.43■□□□□ 0.54
LRFN1-201ENST00000248668 UVSSAQ2YD98 709 aa18.42■□□□□ 0.54
LRFN1-201ENST00000248668 HS1BP3Q53T59 392 aa18.42■□□□□ 0.54
LRFN1-201ENST00000248668 TICAM2Q86XR7 235 aa18.42■□□□□ 0.54
LRFN1-201ENST00000248668 CLSTN2Q9H4D0 955 aa18.42■□□□□ 0.54
LRFN1-201ENST00000248668 UBE2Q2LH0YL09 131 aa18.42■□□□□ 0.54
LRFN1-201ENST00000248668 PARP10Q53GL7 1025 aa18.42■□□□□ 0.54
LRFN1-201ENST00000248668 LCORLQ8N3X6 602 aa18.42■□□□□ 0.54
LRFN1-201ENST00000248668 DNAJC25Q9H1X3 360 aa18.42■□□□□ 0.54
LRFN1-201ENST00000248668 ZNF512BQ96KM6 892 aaPredicted RBP18.42■□□□□ 0.54
LRFN1-201ENST00000248668 DDX19AQ9NUU7 478 aaKnown RBP18.42■□□□□ 0.54
LRFN1-201ENST00000248668 ABCC12Q96J65 1359 aa18.42■□□□□ 0.54
LRFN1-201ENST00000248668 IFNL3Q8IZI9 196 aa18.41■□□□□ 0.54
LRFN1-201ENST00000248668 ANKRD36CQ5JPF3 1778 aa18.41■□□□□ 0.54
LRFN1-201ENST00000248668 TDO2P48775 406 aa18.41■□□□□ 0.54
LRFN1-201ENST00000248668 CCDC82Q8N4S0 544 aa18.41■□□□□ 0.54
LRFN1-201ENST00000248668 ANGEL1Q9UNK9 670 aaKnown RBP18.41■□□□□ 0.54
LRFN1-201ENST00000248668 SMIM22K7EJ46 135 aa18.41■□□□□ 0.54
LRFN1-201ENST00000248668 METAP2P50579 478 aaKnown RBP eCLIP18.41■□□□□ 0.54
LRFN1-201ENST00000248668 SRP68Q9UHB9 627 aaKnown RBP18.41■□□□□ 0.54
LRFN1-201ENST00000248668 TACC3Q9Y6A5 838 aa18.41■□□□□ 0.54
LRFN1-201ENST00000248668 SASS6Q6UVJ0 657 aa18.4■□□□□ 0.54
LRFN1-201ENST00000248668 CLIC4Q9Y696 253 aa18.4■□□□□ 0.54
LRFN1-201ENST00000248668 SLC4A4Q9Y6R1 1079 aa18.4■□□□□ 0.54
LRFN1-201ENST00000248668 PLCH1Q4KWH8 1693 aa18.4■□□□□ 0.54
LRFN1-201ENST00000248668 AHDC1Q5TGY3 1603 aaPredicted RBP18.4■□□□□ 0.54
LRFN1-201ENST00000248668 KIF28PB7ZC32 967 aa18.39■□□□□ 0.54
LRFN1-201ENST00000248668 CDC27P30260 824 aa18.39■□□□□ 0.54
LRFN1-201ENST00000248668 TMEM67Q5HYA8 995 aa18.39■□□□□ 0.54
LRFN1-201ENST00000248668 FSIP1Q8NA03 581 aa18.39■□□□□ 0.54
LRFN1-201ENST00000248668 FAM200AQ8TCP9 573 aa18.39■□□□□ 0.54
LRFN1-201ENST00000248668 ZNF396Q96N95 335 aaPredicted RBP18.39■□□□□ 0.54
LRFN1-201ENST00000248668 CBX8Q9HC52 389 aa18.39■□□□□ 0.54
LRFN1-201ENST00000248668 DHX16O60231 1041 aaKnown RBP18.39■□□□□ 0.53
LRFN1-201ENST00000248668 SF3A1Q15459 793 aaKnown RBP18.39■□□□□ 0.53
LRFN1-201ENST00000248668 SDR42E1Q8WUS8 393 aa18.39■□□□□ 0.53
LRFN1-201ENST00000248668 RAI14Q9P0K7 980 aa18.39■□□□□ 0.53
LRFN1-201ENST00000248668 RCOR1Q9UKL0 485 aa18.39■□□□□ 0.53
LRFN1-201ENST00000248668 MYH7P12883 1935 aa18.39■□□□□ 0.53
LRFN1-201ENST00000248668 EVCP57679 992 aa18.39■□□□□ 0.53
LRFN1-201ENST00000248668 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms