RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 CKS2P33552 79 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 G6PC2Q9NQR9 355 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 SPTBP11277 2137 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 NRIP2Q9BQI9 281 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 ZG16O60844 167 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 C19orf54Q5BKX5 351 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 PCSK4Q6UW60 755 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 PQLC2Q6ZP29 291 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 Q71RC1 249 aaPredicted RBP12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 DDB2Q92466 427 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 PGLYRP4Q96LB8 373 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 S1PR2O95136 353 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 CD99P14209 185 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 SMAGPQ0VAQ4 97 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 SMDT1Q9H4I9 107 aa12.61□□□□□ -0.39
HNRNPU-226ENST00000640218 SIGLEC5O15389 551 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 CTHRC1Q96CG8 243 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 SFXN3Q9BWM7 321 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 EIF3GO75821 320 aaKnown RBP eCLIP12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 FAM53AQ6NSI3 398 aaPredicted RBP12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 TUBGCP6Q96RT7 1819 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 MARCH11A6NNE9 402 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 KBTBD11O94819 623 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 CD74P04233 296 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 KLK2P20151 261 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 AMMECR1LQ6DCA0 310 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 IGKV3D-11A0A0A0MRZ8 115 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 IGHV1-69-2A0A0G2JMI3 117 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 PIN1P1O15428 100 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 IGKV3-11P04433 115 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 TNFRSF9Q07011 255 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 SAXO1Q8IYX7 474 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 FDCSPQ8NFU4 85 aa12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 HSPE1P61604 102 aaKnown RBP12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 MEF2BQ02080 365 aaPredicted RBP12.6□□□□□ -0.39
HNRNPU-226ENST00000640218 SMIM6P0DI80 62 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 SPSB2Q99619 263 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 ELOVL1Q9BW60 279 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 QTRT1Q9BXR0 403 aaKnown RBP12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 SYNGR3O43761 229 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 Q96M66 194 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 DNAJC4Q9NNZ3 241 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 CRYBA2P53672 197 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 JPT1Q9UK76 154 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 ARL14EPLP0DKL9 152 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 ATP5G2Q06055 141 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 TIMP4Q99727 224 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 IGHV3-48P01763 117 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 FAM181AQ8N9Y4 354 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 TMEM54Q969K7 222 aa12.59□□□□□ -0.39
HNRNPU-226ENST00000640218 M0QZK8 103 aa12.58□□□□□ -0.39
HNRNPU-226ENST00000640218 GGCTO75223 188 aaKnown RBP12.58□□□□□ -0.39
HNRNPU-226ENST00000640218 IFI6P09912 130 aa12.58□□□□□ -0.39
HNRNPU-226ENST00000640218 COX5BP10606 129 aa12.58□□□□□ -0.39
HNRNPU-226ENST00000640218 FAM106AQ4KMX7 169 aa12.58□□□□□ -0.39
HNRNPU-226ENST00000640218 C5orf66Q9H5L9 145 aa12.58□□□□□ -0.39
HNRNPU-226ENST00000640218 PHLDA3Q9Y5J5 127 aa12.58□□□□□ -0.39
HNRNPU-226ENST00000640218 RPLP1P05386 114 aaKnown RBP12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 STAG3L2P0CL84 134 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 ZNF25P17030 456 aaPredicted RBP12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 PTGDSP41222 190 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 ZNF818PQ6ZRF7 136 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 OR4C13Q8NGP0 309 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 H3BTX0 84 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 IGHMP01871 453 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 PKIAP61925 76 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 FXYD3Q14802 87 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 LAMTOR1Q6IAA8 161 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 PNKDQ8N490 385 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 HSPB9Q9BQS6 159 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 NRN1LQ496H8 165 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 OR9G1Q8NH87 305 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 A0A1W2PR77 199 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 NPIPB6E9PJ23 425 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 H7C2G1 150 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 CA2P00918 260 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 HERPUD1Q15011 391 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 ZNF660Q6AZW8 331 aaPredicted RBP12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 PET117Q6UWS5 81 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 CLEC7AQ9BXN2 247 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 RECKO95980 971 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 CX3CL1P78423 397 aa12.58□□□□□ -0.4
HNRNPU-226ENST00000640218 TRGC2P03986 189 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 HSPB1P04792 205 aaKnown RBP12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 LBHQ53QV2 105 aaPredicted RBP12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 SCARF2Q96GP6 870 aaPredicted RBP12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 SH3BGRL3Q9H299 93 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 NUDT3O95989 172 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 THY1P04216 161 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 PDLIM4P50479 330 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 SIGLEC12Q96PQ1 595 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 RARRES2Q99969 163 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 CDC42EP3Q9UKI2 254 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 TRAV30A0A087WSZ9 112 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 LIPFP07098 398 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 HTN3P15516 51 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 TMEM177Q53S58 311 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 RAB37Q96AX2 223 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 SGK494Q96LW2 274 aa12.57□□□□□ -0.4
HNRNPU-226ENST00000640218 RFPL3SP0C7P2 107 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms