RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 MARCH11A6NNE9 402 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 PPP1R2P9O14990 202 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 MPDU1O75352 247 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 PROP1O75360 226 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 VENTXO95231 258 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR9G9P0C7N8 305 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 CGB3P0DN86 165 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 CGB7P0DN87 165 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 IGHV3-43DP0DP04 118 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 EGR1P18146 543 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 SSTR5P35346 364 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 VDAC2P45880 294 aaPredicted RBP7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 GPR12P47775 334 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 RPP30P78346 268 aaKnown RBP7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 MORN2Q502X0 79 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 PYY3Q5JQD4 70 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 LURAP1LQ8IV03 231 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR10A7Q8NGE5 316 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 RAB1CQ92928 201 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 ANAPC16Q96DE5 110 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 STARD4Q96DR4 205 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 DCTN5Q9BTE1 182 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 QTRT1Q9BXR0 403 aaKnown RBP7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 PARLQ9H300 379 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 MSL2Q9HCI7 577 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 PROCRQ9UNN8 238 aa7.99□□□□□ -1.13
IGHV3-54-201ENST00000622166 AHCTF1Q8WYP5 2266 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 IGKV1D-17A0A075B6S4 117 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 MBD3L4A6NDZ8 208 aaPredicted RBP7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 MBD3L3A6NE82 208 aaPredicted RBP7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 MBD3L5A6NJ08 208 aaPredicted RBP7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 PRSS46E5RG02 174 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 CEACAM4O75871 244 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 TNFSF13O75888 250 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 IGHV3-13P01766 116 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 GYPAP02724 150 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 SOD3P08294 240 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 CDC34P49427 236 aaPredicted RBP7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 TMPRSS3P57727 454 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 ADIRFQ15847 76 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 COA6Q5JTJ3 125 aaKnown RBP7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 IGF2-ASQ6U949 168 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 TPRX1Q8N7U7 411 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR51G1Q8NGK1 321 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 MBD3L2Q8NHZ7 208 aaPredicted RBP7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 RFESDQ8TAC1 157 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 TXNDC17Q9BRA2 123 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 ASCL3Q9NQ33 180 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 DKK4Q9UBT3 224 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 PITPNC1Q9UKF7 332 aa7.98□□□□□ -1.13
IGHV3-54-201ENST00000622166 GTF3C1Q12789 2109 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 TNRC18O15417 2968 aaPredicted RBP7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 EYSQ5T1H1 3165 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 TRGV8A0A0C4DH27 118 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 DEFB108AA8MXU0 73 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 F6UZH7 168 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 H7BYZ3 331 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 PAGE4O60829 102 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 FCGR3BO75015 233 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 GGCTO75223 188 aaKnown RBP7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 LHBP01229 141 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 TYMSP04818 313 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 CD1BP29016 333 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 SRP14P37108 136 aaKnown RBP7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 PLA2G5P39877 138 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 OPRK1P41145 380 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 LOXL3P58215 753 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 HOXA4Q00056 320 aaPredicted RBP7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 RELBQ01201 579 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 TLE1Q04724 770 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 SRSF6Q13247 344 aaKnown RBP7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 MSMPQ1L6U9 139 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 PRAMEF5Q5TYX0 476 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 FAM180AQ6UWF9 173 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 GCSAMQ8N6F7 178 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR2Z1Q8NG97 314 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR10D4PQ8NGN7 298 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR4F5Q8NH21 305 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR4X1Q8NH49 305 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 Q8TCH9 128 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 FAM222BQ8WU58 562 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 GATAD1Q8WUU5 269 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 DDB2Q92466 427 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 S100PBPQ96BU1 408 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 RPUSD4Q96CM3 377 aaKnown RBP7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR5B12Q96R08 314 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR4F4Q96R69 305 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 GPR61Q9BZJ8 451 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 OPN3Q9H1Y3 402 aaPredicted RBP7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 RAB9BQ9NP90 201 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 FZR1Q9UM11 496 aa7.97□□□□□ -1.13
IGHV3-54-201ENST00000622166 ZNF729A6NN14 1252 aaPredicted RBP7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 M0R1X1 148 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 TMPRSS2O15393 492 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 GALR2O43603 387 aaPredicted RBP7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 PDE6DO43924 150 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 RBMXL2O75526 392 aaKnown RBP7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 HRASP01112 189 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 CD99P14209 185 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms