RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CCDC107Q8WV48 283 aa6.96□□□□□ -1.3
GPC6-202ENST00000617456 C10orf35Q96D05 121 aa6.96□□□□□ -1.3
GPC6-202ENST00000617456 GALNT14Q96FL9 552 aa6.96□□□□□ -1.3
GPC6-202ENST00000617456 SDSLQ96GA7 329 aa6.96□□□□□ -1.3
GPC6-202ENST00000617456 LYZL4Q96KX0 146 aa6.96□□□□□ -1.3
GPC6-202ENST00000617456 GABARAPL1Q9H0R8 117 aa6.96□□□□□ -1.3
GPC6-202ENST00000617456 CLN6Q9NWW5 311 aa6.96□□□□□ -1.3
GPC6-202ENST00000617456 TVP23BQ9NYZ1 205 aa6.96□□□□□ -1.3
GPC6-202ENST00000617456 DNAJC27Q9NZQ0 273 aa6.96□□□□□ -1.3
GPC6-202ENST00000617456 ZNRD1Q9P1U0 126 aa6.96□□□□□ -1.3
GPC6-202ENST00000617456 DNAH3Q8TD57 4116 aa6.96□□□□□ -1.3
GPC6-202ENST00000617456 TRAV8-7A0A075B6U6 113 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 ZAR1LA6NP61 321 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 NPFFO15130 113 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 FGF16O43320 207 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 SAP30O75446 220 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 FCN3O75636 299 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 MPIG6BO95866 241 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 PMP2P02689 132 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 VSIG10L2P0DP72 767 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 CD37P11049 281 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 PRKACGP22612 351 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 ARL3P36405 182 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 DAPP51397 102 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 CLDN12P56749 244 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 LY6EQ16553 131 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 RNF151Q2KHN1 245 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 COX19Q49B96 90 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 SLC22A6Q4U2R8 563 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 C11orf87Q6NUJ2 197 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 GSG1LQ6UXU4 331 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 S100A7AQ86SG5 101 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 C11orf42Q8N5U0 333 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 KLHDC1Q8N7A1 406 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 OR4S1Q8NGB4 309 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 OR10K1Q8NGX5 313 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 PPP1R35Q8TAP8 253 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 AQP3Q92482 292 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 PIGCQ92535 297 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 TOMM40LQ969M1 308 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 MBOAT4Q96T53 435 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 CCL13Q99616 98 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 PBOV1Q9GZY1 135 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 NLKQ9UBE8 527 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 SLC25A10Q9UBX3 287 aaPredicted RBP6.95□□□□□ -1.3
GPC6-202ENST00000617456 FBLN5Q9UBX5 448 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 ZNF222Q9UK12 451 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 POLDIP2Q9Y2S7 368 aa6.95□□□□□ -1.3
GPC6-202ENST00000617456 RBM7Q9Y580 266 aaKnown RBP6.95□□□□□ -1.3
GPC6-202ENST00000617456 LOC100130705A0A1B0GUX0 176 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 SMCO3A2RU48 225 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 ZNF670-ZNF695F2Z2N8 137 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 RNASEK-C17orf49H0YIS7 233 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 H3BUX3 64 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 PPP1R2P9O14990 202 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 SRSF10O75494 262 aaKnown RBP6.94□□□□□ -1.3
GPC6-202ENST00000617456 NRASP01111 189 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 IGHG4P01861 327 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 TK1P04183 234 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 GZMBP10144 247 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 SLC2A2P11168 524 aaPredicted RBP6.94□□□□□ -1.3
GPC6-202ENST00000617456 MGMTP16455 207 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 AMY2BP19961 511 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 CCL1P22362 96 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 EFNB2P52799 333 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 RAB11AP62491 216 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 RANP62826 216 aaKnown RBP6.94□□□□□ -1.3
GPC6-202ENST00000617456 HERV-K104P63124 156 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 PITPNAQ00169 270 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 OR5I1Q13606 314 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 C5orf47Q569G3 176 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 SLC25A30Q5SVS4 291 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 ZNF684Q5T5D7 378 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 SAMD13Q5VXD3 122 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 C12orf73Q69YU5 71 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 AWAT2Q6E213 333 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 DUX4L9Q6RFH8 374 aaPredicted RBP6.94□□□□□ -1.3
GPC6-202ENST00000617456 ZNF322Q6U7Q0 402 aaPredicted RBP6.94□□□□□ -1.3
GPC6-202ENST00000617456 ZNF562Q6V9R5 426 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 POC1AQ8NBT0 407 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 OR4C13Q8NGP0 309 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 OR2T27Q8NH04 317 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 YPEL4Q96NS1 127 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 GAFA1Q96PS6 74 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 C20orf144Q9BQM9 153 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 RSRP1Q9BUV0 290 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 HINT2Q9BX68 163 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 FAM234AQ9H0X4 552 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 GPR84Q9NQS5 396 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 DOK5Q9P104 306 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 IKZF2Q9UKS7 526 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 GSTK1Q9Y2Q3 226 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 KLHDC2Q9Y2U9 406 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 SF3B6Q9Y3B4 125 aaKnown RBP6.94□□□□□ -1.3
GPC6-202ENST00000617456 R4GMQ9 66 aa6.94□□□□□ -1.3
GPC6-202ENST00000617456 TRAV26-1A0A087WT03 109 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 A0A1B0GW15 77 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 ZNF732B4DXR9 585 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 PHOX2AO14813 284 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms