RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 OPN1MW2P0DN77 364 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 OPN1MW3P0DN78 364 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 OR3A1P47881 315 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 OR5B12Q96R08 314 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 METRNQ9UJH8 293 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 KRASP01116 189 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 IRF2P14316 349 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 TDGF1P3P51864 188 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 ZNF816Q0VGE8 651 aaPredicted RBP12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 IL22RA2Q969J5 263 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 PLK3Q9H4B4 646 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 Q9N2K0 584 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 ZNF391Q9UJN7 358 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 H7BYZ3 331 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 TGOLN2O43493 480 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 IFNA5P01569 189 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 DTYMKP23919 212 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 GALR1P47211 349 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 BEND2Q8NDZ0 799 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 TMEM18Q96B42 140 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 GNPNAT1Q96EK6 184 aaPredicted RBP12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 ACTR3CQ9C0K3 210 aaPredicted RBP12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 SDF2L1Q9HCN8 221 aa12.19□□□□□ -0.46
SHROOM1-208ENST00000617339 CECR9P0C854 216 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 BCL2P10415 239 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 SPSB4Q96A44 273 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 SDSLQ96GA7 329 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 TFPI2P48307 235 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 TMEM211Q6ICI0 200 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 SSX7Q7RTT5 188 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 CCDC71LQ8N9Z2 235 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 OR52L2PQ8NGH6 319 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 OR1L1Q8NH94 360 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 LEAP2Q969E1 77 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 FKBP11Q9NYL4 201 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 SVEP1Q4LDE5 3571 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 PSPNO60542 156 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 GNG10P50151 68 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 GABRA6Q16445 453 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 BHLHA15Q7RTS1 189 aaPredicted RBP12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 SCGB1C1Q8TD33 95 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 MOB3AQ96BX8 217 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 ZDHHC11Q9H8X9 412 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 NOTCH3Q9UM47 2321 aa12.18□□□□□ -0.46
SHROOM1-208ENST00000617339 VSTM5A8MXK1 200 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 B4DEV8 164 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 TRDCB7Z8K6 153 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 GCGP01275 180 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 COTL1Q14019 142 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 IQCJQ1A5X6 159 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 DNLZQ5SXM8 178 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 H1FXQ92522 213 aaKnown RBP12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 RBKSQ9H477 322 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 LYRM2Q9NU23 88 aaPredicted RBP12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 YLPM1P49750 1951 aaKnown RBP12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 FAM3BP58499 235 aaPredicted RBP12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 PRR30Q53SZ7 412 aaPredicted RBP12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 SPACA3Q8IXA5 215 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 ABHD14BQ96IU4 210 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 SRD5A3Q9H8P0 318 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 DLEU1O43261 78 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 RND2P52198 227 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 CCL8P80075 99 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 PIP4P1Q86T03 277 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 PRR7Q8TB68 274 aa12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 RCC1LQ96I51 464 aaKnown RBP12.17□□□□□ -0.46
SHROOM1-208ENST00000617339 A0A0U1RQK1 487 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 PAX1P15863 534 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 CHRNA7P36544 502 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 SPRNQ5BIV9 151 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 MRPL30Q8TCC3 161 aaKnown RBP12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 TBX15Q96SF7 602 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 DIRC2Q96SL1 478 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 TRBV24-1A0A075B6N3 115 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 TCF21O43680 179 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 METTL15P1P0C7V9 234 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 SSTR5P35346 364 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 ERVFC1-1P60608 527 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 ARSJQ5FYB0 599 aaPredicted RBP12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 OR51I2Q9H344 312 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 A0A0G2JRQ6 117 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 RPLP1P05386 114 aaKnown RBP12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 TAS2R30P59541 319 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 TOMM20LQ6UXN7 152 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 TMEM256Q8N2U0 113 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 POLR3KQ9Y2Y1 108 aaPredicted RBP12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 MPC1Q9Y5U8 109 aa12.16□□□□□ -0.46
SHROOM1-208ENST00000617339 KIR2DS1A0A191URI9 304 aa12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 KIR2DS4P43632 304 aa12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 KIR2DS1Q14954 304 aa12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 OR8G2PQ6IF36 304 aa12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 Q6ZT83 130 aa12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 ODF3L1Q8IXM7 274 aa12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 CCL17Q92583 94 aa12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 ATP5SQ99766 215 aa12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 PAM16Q9Y3D7 125 aa12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 PPIAL4AQ9Y536 164 aa12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 PNRC1Q12796 327 aaPredicted RBP12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 OR5I1Q13606 314 aa12.15□□□□□ -0.46
SHROOM1-208ENST00000617339 BSXQ3C1V8 233 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms