RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 TFF3Q07654 80 aa12.18□□□□□ -0.46
EPHB4-210ENST00000616502 PRSS8Q16651 343 aa12.18□□□□□ -0.46
EPHB4-210ENST00000616502 PTPRQQ9UMZ3 2332 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 FOXI3A8MTJ6 420 aaPredicted RBP12.17□□□□□ -0.46
EPHB4-210ENST00000616502 CDIPTO14735 213 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 C1QTNF9P0C862 333 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 CISD2Q8N5K1 135 aaKnown RBP12.17□□□□□ -0.46
EPHB4-210ENST00000616502 ZDHHC16Q969W1 377 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 BORCS7Q96B45 105 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 IMMP1LQ96LU5 166 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 TECTBQ96PL2 329 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 OR6C3Q9NZP0 311 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 AGFG2O95081 481 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 GCH1P30793 250 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 C11orf42Q8N5U0 333 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 TMEM68Q96MH6 324 aa12.17□□□□□ -0.46
EPHB4-210ENST00000616502 SNURFLB1AK76 121 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 H0Y8G0 127 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 KLK10O43240 276 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 SIAH2O43255 324 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 NAPSAO96009 420 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 IL3RAP26951 378 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 PTGDSP41222 190 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 ATP5G3P48201 142 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 CEBPDP49716 269 aaPredicted RBP12.16□□□□□ -0.46
EPHB4-210ENST00000616502 HNRNPA3P51991 378 aaKnown RBP12.16□□□□□ -0.46
EPHB4-210ENST00000616502 Q6ZN92 141 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 MRGPRDQ8TDS7 321 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 TMEM170AQ8WVE7 144 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 GALMQ96C23 342 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 PLSCR2Q9NRY7 297 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 PTTG1IPP53801 180 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 PAX9P55771 341 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 MRPL49Q13405 166 aaKnown RBP12.16□□□□□ -0.46
EPHB4-210ENST00000616502 ZNF726P1Q15940 193 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 ZNF439Q8NDP4 499 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 DLL3Q9NYJ7 618 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 ZFYVE26Q68DK2 2539 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 SH2D1BO14796 132 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 RAB31Q13636 194 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 CARFQ8N187 725 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 TMEM251Q8N6I4 163 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 ZIC4Q8N9L1 334 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 CPEB3Q8NE35 698 aaKnown RBP12.16□□□□□ -0.46
EPHB4-210ENST00000616502 RBM14Q96PK6 669 aaKnown RBP12.16□□□□□ -0.46
EPHB4-210ENST00000616502 PSG11Q9UQ72 335 aa12.16□□□□□ -0.46
EPHB4-210ENST00000616502 SLC17A3O00476 420 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 RHBDL1O75783 438 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 RND2P52198 227 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 GCSAMLQ5JQS6 135 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 ETFRF1Q6IPR1 90 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 ACSM6Q6P461 480 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 CIB3Q96Q77 187 aaPredicted RBP12.15□□□□□ -0.46
EPHB4-210ENST00000616502 HIPK2Q9H2X6 1198 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 DECR2Q9NUI1 292 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 RAB4AP20338 218 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 TNFSF10P50591 281 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 HOXA4Q00056 320 aaPredicted RBP12.15□□□□□ -0.46
EPHB4-210ENST00000616502 ATOH7Q8N100 152 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 OR2M7Q8NG81 312 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 PSMG3Q9BT73 122 aaPredicted RBP12.15□□□□□ -0.46
EPHB4-210ENST00000616502 CEP192Q8TEP8 1941 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 IGLV3-12A0A075B6K2 115 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 MT-CO2P00403 227 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 CRYGSP22914 178 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 CEACAM21Q3KPI0 293 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 SLC25A53Q5H9E4 307 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 OR1L6Q8NGR2 347 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 DERL1Q9BUN8 251 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 TMEM242Q9NWH2 141 aa12.15□□□□□ -0.46
EPHB4-210ENST00000616502 TMEM250H0YL14 139 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
EPHB4-210ENST00000616502 OR7C2O60412 319 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 FCGR3BO75015 233 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 HIST3H3Q16695 136 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 MRPL54Q6P161 138 aaKnown RBP12.14□□□□□ -0.47
EPHB4-210ENST00000616502 FER1L6-AS2Q96M78 137 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 RTL8AQ9BWD3 113 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 TTTY12Q9BZ98 90 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 ACACBO00763 2458 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 KLRC4-KLRK1H3BQV0 150 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 ZNF253O75346 499 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 PFN1P07737 140 aaKnown RBP12.14□□□□□ -0.47
EPHB4-210ENST00000616502 SRD5A2P31213 254 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 DRAM1Q8N682 238 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 SSC4DQ8WTU2 575 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 MBD3L1Q8WWY6 194 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 STARD4Q96DR4 205 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 SF3B5Q9BWJ5 86 aaKnown RBP12.14□□□□□ -0.47
EPHB4-210ENST00000616502 RPH3ALQ9UNE2 315 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 ARFGEF3Q5TH69 2177 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 C20orf202A1L168 122 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 SRP14P37108 136 aaKnown RBP12.14□□□□□ -0.47
EPHB4-210ENST00000616502 ARSJQ5FYB0 599 aaPredicted RBP12.14□□□□□ -0.47
EPHB4-210ENST00000616502 ZNF766Q5HY98 468 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 C20orf204Q6ZNR8 217 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 OR52L2PQ8NGH6 319 aa12.14□□□□□ -0.47
EPHB4-210ENST00000616502 OTX1P32242 354 aaPredicted RBP12.13□□□□□ -0.47
EPHB4-210ENST00000616502 TRA2AQ13595 282 aaKnown RBP eCLIP12.13□□□□□ -0.47
EPHB4-210ENST00000616502 KCNE4Q8WWG9 221 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms