RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	TPPP3	Q9BW30	176 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	OBP2A	Q9NY56	170 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	C3orf79	P0CE67	100 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	ACSF3	Q4G176	576 aa	Predicted RBP	13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	LYG1	Q8N1E2	194 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	OR2H1	Q9GZK4	316 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	PLSCR2	Q9NRY7	297 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	PSG11	Q9UQ72	335 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	FER1L5	A0AVI2	2057 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	GPR6	P46095	362 aa	Predicted RBP	13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	SSX8	Q7RTT4	187 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	NIT1	Q86X76	327 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	SAXO1	Q8IYX7	474 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	OBP2B	Q9NPH6	170 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	IL36B	Q9NZH7	164 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	USF3	Q68DE3	2245 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179		A0A0J9YW62	118 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	NPIPB13	A6NJU9	1138 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	NPIPB4	C9JG80	1138 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	CA1	P00915	261 aa	Predicted RBP	13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	RHBDD2	Q6NTF9	364 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	ZNF841	Q6ZN19	808 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	FAM122A	Q96E09	287 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	OR8B2	Q96RD0	313 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	PYGO2	Q9BRQ0	406 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	DECR2	Q9NUI1	292 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	COX11	Q9Y6N1	276 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	IGKV3D-11	A0A0A0MRZ8	115 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	NGF	P01138	241 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	FGF12	P61328	243 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	GALM	Q96C23	342 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	VWCE	Q96DN2	955 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	S1PR2	O95136	353 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	IGKV1-5	P01602	117 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	TSPO	P30536	169 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	HAPLN4	Q86UW8	402 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	HSD17B10	Q99714	261 aa	Known RBP	13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	PMCHL2	Q9BQD1	86 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	NAA38	Q9BRA0	125 aa	Known RBP	13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	MEGF9	Q9H1U4	602 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	KCNIP2	Q9NS61	270 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179	IL19	Q9UHD0	177 aa		13.25	□□□□□ -0.29
SYNRG-223	ENST00000616179		A0A1W2PPC4	97 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	GPX1	P07203	203 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	NUDT10	Q8NFP7	164 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	MRGPRD	Q8TDS7	321 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	ORAOV1	Q8WV07	137 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	SGK494	Q96LW2	274 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	TRIB1	Q96RU8	372 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	AGMAT	Q9BSE5	352 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	TMEM38B	Q9NVV0	291 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	GAGE10	A6NGK3	116 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	IGHV4-34	P06331	123 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	MPV17L2	Q567V2	206 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	DRAM1	Q8N682	238 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	RAB37	Q96AX2	223 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	DOCK10	Q96BY6	2186 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	ITGB1BP1	O14713	200 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	RAMP3	O60896	148 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	FOXA3	P55318	350 aa	Predicted RBP	13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	TEX43	Q6ZNM6	134 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	OR1L1	Q8NH94	360 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	C12orf49	Q9H741	205 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	CRIM1	Q9NZV1	1036 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	HTT	P42858	3142 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	VCAN	P13611	3396 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	CXorf1	O96002	111 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	FRMD6-AS1	P0C7T7	363 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	IGLC2	P0DOY2	106 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	IGLC3	P0DOY3	106 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	TIMP3	P35625	211 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	PDLIM4	P50479	330 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	ZNF137P	P52743	207 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	BPIFB3	P59826	476 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	ABHD3	Q8WU67	409 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	SLC45A2	Q9UMX9	530 aa		13.24	□□□□□ -0.29
SYNRG-223	ENST00000616179	LILRA5	A6NI73	299 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	BMPR1B	O00238	502 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	CCL3	P10147	92 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	ASPHD1	Q5U4P2	390 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	FBXW9	Q5XUX1	488 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	OR52L2P	Q8NGH6	319 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	FAM216A	Q8WUB2	273 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	CEBPD	P49716	269 aa	Predicted RBP	13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	SSR4	P51571	173 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	MRPS21	P82921	87 aa	Known RBP	13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	FOXL1	Q12952	345 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	PMCHL1	Q16048	86 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	ZNF324	O75467	553 aa	Predicted RBP	13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	PIAS2	O75928	621 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	LHX2	P50458	406 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	GFRA1	P56159	465 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	VKORC1L1	Q8N0U8	176 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	OR5P3	Q8WZ94	311 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	CHRDL1	Q9BU40	450 aa		13.23	□□□□□ -0.29
SYNRG-223	ENST00000616179	MCRIP2	Q9BUT9	160 aa	Known RBP	13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms