RNA–Protein interactions for RNA: ENST00000614998.4

PER3-209, Transcript of period circadian regulator 3, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PER3, Length 6,261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PER3-209	ENST00000614998	TNFSF18	Q9UNG2	199 aa		11.35	□□□□□ -0.59
PER3-209	ENST00000614998	SCN3A	Q9NY46	2000 aa		11.35	□□□□□ -0.59
PER3-209	ENST00000614998	PGLYRP1	O75594	196 aa	Predicted RBP	11.35	□□□□□ -0.59
PER3-209	ENST00000614998	RECK	O95980	971 aa		11.35	□□□□□ -0.59
PER3-209	ENST00000614998	SEC11B	P0C7V7	166 aa		11.35	□□□□□ -0.59
PER3-209	ENST00000614998	NSUN5P1	Q3KNT7	163 aa		11.35	□□□□□ -0.59
PER3-209	ENST00000614998	OR4D5	Q8NGN0	318 aa		11.35	□□□□□ -0.59
PER3-209	ENST00000614998	ABHD17A	Q96GS6	310 aa		11.35	□□□□□ -0.59
PER3-209	ENST00000614998	CFD	P00746	253 aa	Predicted RBP	11.34	□□□□□ -0.59
PER3-209	ENST00000614998	HSPB1	P04792	205 aa	Known RBP	11.34	□□□□□ -0.59
PER3-209	ENST00000614998	FABP2	P12104	132 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	MESP2	Q0VG99	397 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	PAPPA-AS1	Q5QFB9	102 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	TMEM170B	Q5T4T1	132 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	C11orf44	Q8N8P7	122 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	SP7	Q8TDD2	431 aa	Predicted RBP	11.34	□□□□□ -0.59
PER3-209	ENST00000614998	HSPB9	Q9BQS6	159 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	IGHV3-11	P01762	117 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	TCF24	Q7RTU0	167 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	NPIPB3	Q92617	1050 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	IGHV3OR16-8	A0A075B7F1	116 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	MARCH11	A6NNE9	402 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	IGKV1D-33	P01593	117 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	IGKV1-33	P01594	117 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	MAL	P21145	153 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	CDKN1A	P38936	164 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	NANOS3	P60323	173 aa	Known RBP	11.34	□□□□□ -0.59
PER3-209	ENST00000614998	CSRP2	Q16527	193 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	TMEM183A	Q8IXX5	376 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	ZNF383	Q8NA42	475 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	JPT1	Q9UK76	154 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	NRXN3	Q9Y4C0	1643 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	ZG16	O60844	167 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	LEPROTL1	O95214	131 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	ASAH2B	P0C7U1	165 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	C8orf88	P0DMB2	117 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	HKR1	P10072	659 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	ABLIM2	Q6H8Q1	611 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	EIF3G	O75821	320 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
PER3-209	ENST00000614998	FAM209A	Q5JX71	171 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998	KCNK7	Q9Y2U2	307 aa		11.34	□□□□□ -0.59
PER3-209	ENST00000614998		A0A0G2JLM5	398 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	LNP1	A1A4G5	178 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	ZNRF1	Q8ND25	227 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	TMEM45B	Q96B21	275 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	TMEM106B	Q9NUM4	274 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	ARL14EPL	P0DKL9	152 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	COTL1	Q14019	142 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	JMJD8	Q96S16	334 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	PKIB	Q9C010	78 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	TMEM222	Q9H0R3	208 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998		H7C1H1	209 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	FBXL7	Q9UJT9	491 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	PAPPA	Q13219	1627 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998		A0A1W2PPC1	479 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	NGFR	P08138	427 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	RFLNB	Q8N5W9	214 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	DEFB121	Q5J5C9	76 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	TMEM252	Q8N6L7	170 aa		11.33	□□□□□ -0.6
PER3-209	ENST00000614998	REPIN1	Q9BWE0	567 aa	Known RBP	11.33	□□□□□ -0.6
PER3-209	ENST00000614998	EPOP	A6NHQ4	379 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998		M0QZK8	103 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	GGCT	O75223	188 aa	Known RBP	11.32	□□□□□ -0.6
PER3-209	ENST00000614998	VDAC2	P45880	294 aa	Predicted RBP	11.32	□□□□□ -0.6
PER3-209	ENST00000614998	JOSD1	Q15040	202 aa	Predicted RBP	11.32	□□□□□ -0.6
PER3-209	ENST00000614998	NUDT10	Q8NFP7	164 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	DNASE2B	Q8WZ79	361 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	GPR146	Q96CH1	333 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	NUDT11	Q96G61	164 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	PRELID3A	Q96N28	172 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	TMEM70	Q9BUB7	260 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	FBXL15	Q9H469	300 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	PEMT	Q9UBM1	199 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998		A0A1W2PQM1	296 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	TSPAN13	O95857	204 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	CRYBB3	P26998	211 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	SLC25A47	Q6Q0C1	308 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998		A0A1B0GUL6	1792 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	DDX60L	Q5H9U9	1706 aa	Known RBP	11.32	□□□□□ -0.6
PER3-209	ENST00000614998	GPR183	P32249	361 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	CLEC19A	Q6UXS0	136 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	TRPM6	Q9BX84	2022 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	GAGE10	A6NGK3	116 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	BSPH1	Q075Z2	132 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	PPP1R27	Q86WC6	154 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	STH	Q8IWL8	128 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	SEMA5B	Q9P283	1151 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	SCN9A	Q15858	1988 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	ASIP	P42127	132 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	SPATA45	Q537H7	98 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	ERAS	Q7Z444	233 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	OR11H7	Q8NGC8	314 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	VGLL1	Q99990	258 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	C2orf88	Q9BSF0	95 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	METRN	Q9UJH8	293 aa		11.32	□□□□□ -0.6
PER3-209	ENST00000614998	TRAV24	A0A0B4J272	114 aa		11.31	□□□□□ -0.6
PER3-209	ENST00000614998	CLDND2	Q8NHS1	167 aa		11.31	□□□□□ -0.6
PER3-209	ENST00000614998	NEU4	Q8WWR8	484 aa	Predicted RBP	11.31	□□□□□ -0.6
PER3-209	ENST00000614998	ARID1A	O14497	2285 aa		11.31	□□□□□ -0.6
PER3-209	ENST00000614998	TAF1	P21675	1872 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms