RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 ZNF296Q8WUU4 475 aaPredicted RBP10.66□□□□□ -0.7
SHANK2-218ENST00000601538 HIST1H2BLQ99880 126 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 PRDM13Q9H4Q3 707 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 ZNF831Q5JPB2 1677 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 TRBV23-1A0A0A0MS06 115 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 EML2O95834 649 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 INSIG2Q9Y5U4 225 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 CEACAM18A8MTB9 384 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 K7ESM1 405 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 APOMO95445 188 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 PLPPR1Q8TBJ4 325 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 FRRS1LQ9P0K9 344 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 PPIHO43447 177 aaKnown RBP10.66□□□□□ -0.7
SHANK2-218ENST00000601538 IL11RAQ14626 422 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 BEX4Q9NWD9 120 aaPredicted RBP10.66□□□□□ -0.7
SHANK2-218ENST00000601538 FAM117AQ9C073 453 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 TMEM222Q9H0R3 208 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 CLEC1BQ9P126 229 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 MRM2Q9UI43 246 aaKnown RBP10.66□□□□□ -0.7
SHANK2-218ENST00000601538 CYSLTR1Q9Y271 337 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 TMIGD3P0DMS9 266 aaPredicted RBP10.66□□□□□ -0.7
SHANK2-218ENST00000601538 PAQR9Q6ZVX9 377 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 SMIM14Q96QK8 99 aa10.66□□□□□ -0.7
SHANK2-218ENST00000601538 CDKN1BP46527 198 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 Q5BKY6 102 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 GCSAMLQ5JQS6 135 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 LDLRAD2Q5SZI1 272 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 ZNF714Q96N38 554 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 SLC6A13Q9NSD5 602 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 TRAV1-1A0A0B4J248 108 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 IGHV3-20A0A0C4DH32 117 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 F12P00748 615 aaPredicted RBP10.65□□□□□ -0.7
SHANK2-218ENST00000601538 ZNF32P17041 273 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 TSPOP30536 169 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 INSL4Q14641 139 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 CACNA1EQ15878 2313 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 KCNE1BA0A087WTH5 132 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 CD5P06127 495 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 HIST3H2BBQ8N257 126 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 TMEM170AQ8WVE7 144 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 OR8B2Q96RD0 313 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 SF3B5Q9BWJ5 86 aaKnown RBP10.65□□□□□ -0.7
SHANK2-218ENST00000601538 TRGV5A0A0B4J1U4 118 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 TMPRSS2O15393 492 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 A8MWP6 167 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 LHFPL4Q7Z7J7 247 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 LILRA3Q8N6C8 439 aaPredicted RBP10.65□□□□□ -0.7
SHANK2-218ENST00000601538 GPR35Q9HC97 309 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 EML6Q6ZMW3 1958 aa10.65□□□□□ -0.7
SHANK2-218ENST00000601538 RNF222A6NCQ9 220 aa10.65□□□□□ -0.71
SHANK2-218ENST00000601538 F11P03951 625 aa10.65□□□□□ -0.71
SHANK2-218ENST00000601538 HOXC4P09017 264 aaPredicted RBP10.65□□□□□ -0.71
SHANK2-218ENST00000601538 CXorf67Q86X51 503 aaPredicted RBP10.65□□□□□ -0.71
SHANK2-218ENST00000601538 OR13H1Q8NG92 308 aa10.65□□□□□ -0.71
SHANK2-218ENST00000601538 CITED1Q99966 193 aa10.65□□□□□ -0.71
SHANK2-218ENST00000601538 MMP17Q9ULZ9 603 aa10.65□□□□□ -0.71
SHANK2-218ENST00000601538 COLCA2A8K830 154 aa10.65□□□□□ -0.71
SHANK2-218ENST00000601538 RFESDQ8TAC1 157 aa10.65□□□□□ -0.71
SHANK2-218ENST00000601538 ELSPBP1Q96BH3 223 aa10.65□□□□□ -0.71
SHANK2-218ENST00000601538 C16orf92Q96LL3 132 aa10.65□□□□□ -0.71
SHANK2-218ENST00000601538 CACNG7P62955 275 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 PRICKLE4Q2TBC4 344 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 POU2AF1Q16633 256 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 PGLYRP4Q96LB8 373 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 KBTBD11-OT1A0A1B0GTJ5 212 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 K7N7A8 449 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 ARL14EPLP0DKL9 152 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 RFLNAQ6ZTI6 216 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 COL6A6A6NMZ7 2263 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 A0A1W2PRS3 328 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 RAE1P78406 368 aaKnown RBP10.64□□□□□ -0.71
SHANK2-218ENST00000601538 TMEM95Q3KNT9 176 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 CFAP161Q6P656 301 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 C14orf144Q96I85 54 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 LINC00470Q9BZP3 86 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 TMPRSS3P57727 454 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 SFXN3Q9BWM7 321 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 RPL36A-HNRNPH2H7BZ11 118 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 HTN1P15515 57 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 NDUFS6O75380 124 aaKnown RBP10.64□□□□□ -0.71
SHANK2-218ENST00000601538 CTLA4P16410 223 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 ANOS1P23352 680 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 TIMM23BQ5SRD1 257 aa10.64□□□□□ -0.71
SHANK2-218ENST00000601538 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.64□□□□□ -0.715e-9■■■□□ 18.5
SHANK2-218ENST00000601538 IGLV3-16A0A075B6K0 115 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 MPZL1O95297 269 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 VSIG10L2P0DP72 767 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 ESDP10768 282 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 REG4Q9BYZ8 158 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 IL36RNQ9UBH0 155 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 ZNF257Q9Y2Q1 563 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 COL16A1Q07092 1604 aaPredicted RBP10.63□□□□□ -0.71
SHANK2-218ENST00000601538 PSG2P11465 335 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 RASL11AQ6T310 242 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 TMEM91Q6ZNR0 172 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 ZNF645Q8N7E2 425 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 AURKAIP1Q9NWT8 199 aaPredicted RBP10.63□□□□□ -0.71
SHANK2-218ENST00000601538 WBP1LQ9NX94 342 aa10.63□□□□□ -0.71
SHANK2-218ENST00000601538 GAGE2BQ13066 116 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms