RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-205	ENST00000601194	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.19	□□□□□ -0.62
PSMC4-205	ENST00000601194	LYSMD2	Q8IV50	215 aa		11.19	□□□□□ -0.62
PSMC4-205	ENST00000601194	SECTM1	Q8WVN6	248 aa		11.19	□□□□□ -0.62
PSMC4-205	ENST00000601194	HSD17B10	Q99714	261 aa	Known RBP	11.19	□□□□□ -0.62
PSMC4-205	ENST00000601194	ZFP57	Q9NU63	452 aa		11.19	□□□□□ -0.62
PSMC4-205	ENST00000601194	EXTL2	Q9UBQ6	330 aa		11.19	□□□□□ -0.62
PSMC4-205	ENST00000601194	WSB1	Q9Y6I7	421 aa		11.19	□□□□□ -0.62
PSMC4-205	ENST00000601194	PLXNB1	O43157	2135 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	NOTCH3	Q9UM47	2321 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	TRAV41	A0A0B4J266	112 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	SULT1C2	O00338	296 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	CTDSP2	O14595	271 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	SHOX	O15266	292 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	TPPP	O94811	219 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	CRYZL1	O95825	349 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	CA2	P00918	260 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	PMP2	P02689	132 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	RPLP1	P05386	114 aa	Known RBP	11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	ELANE	P08246	267 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	PF4V1	P10720	104 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	EGR2	P11161	476 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	PSMB8	P28062	276 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	DHRS11	Q6UWP2	260 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	ZNF562	Q6V9R5	426 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	LCNL1	Q6ZST4	164 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	PPP1R27	Q86WC6	154 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	LAX1	Q8IWV1	398 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	OR5H2	Q8NGV7	314 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	CLCC1	Q96S66	551 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	SLC5A7	Q9GZV3	580 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	CCL28	Q9NRJ3	127 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	TAS2R8	Q9NYW2	309 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	PRELID3B	Q9Y3B1	194 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	CEPT1	Q9Y6K0	416 aa		11.18	□□□□□ -0.62
PSMC4-205	ENST00000601194	RGS5	O15539	181 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	FCGR3B	O75015	233 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	IGLV1-40	P01703	118 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	HLA-DMA	P28067	261 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	RCVRN	P35243	200 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	HRH1	P35367	487 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	FXYD4	P59646	89 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	HERV-K104	P61576	105 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	SSBP2	P81877	361 aa	Predicted RBP	11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	PJVK	Q0ZLH3	352 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	OR2B11	Q5JQS5	317 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	ZNF66	Q6ZN08	573 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	C18orf65	Q6ZTR6	163 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	MINDY2	Q8NBR6	621 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	OSR1	Q8TAX0	266 aa	Predicted RBP	11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	TCTEX1D2	Q8WW35	142 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	ABHD1	Q96SE0	405 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	GPHA2	Q96T91	129 aa		11.17	□□□□□ -0.62
PSMC4-205	ENST00000601194	ARPC1B	O15143	372 aa	Known RBP	11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	SLC6A1	P30531	599 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	BRWD1-AS2	P59051	145 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	UBE2K	P61086	200 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	ECSCR	Q19T08	205 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	MRGPRG-AS1	Q2M3A8	158 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	ETV3L	Q6ZN32	361 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	TMEM17	Q86X19	198 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	MFSD4A	Q8N468	514 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	ZBTB34	Q8NCN2	500 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	KLHL30-AS1	Q8NEE0	82 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	OR52I2	Q8NH67	350 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	OR4S2	Q8NH73	311 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	MYOZ3	Q8TDC0	251 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	ABHD5	Q8WTS1	349 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	ARPC1A	Q92747	370 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	MOB3A	Q96BX8	217 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	FAM103A1	Q9BTL3	118 aa	Known RBP	11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	SLIRP	Q9GZT3	109 aa	Known RBP	11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	NUBP2	Q9Y5Y2	271 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	A3GALT2	U3KPV4	340 aa		11.16	□□□□□ -0.62
PSMC4-205	ENST00000601194	NUDT19	A8MXV4	375 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	TNFSF12	O43508	249 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	SOX15	O60248	233 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	PF4	P02776	101 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	SAA1	P0DJI8	122 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	GNRHR	P30968	328 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	FXYD3	Q14802	87 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	VMA21	Q3ZAQ7	101 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	RNASE12	Q5GAN4	147 aa	Known RBP	11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	IDO2	Q6ZQW0	420 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	ZNF818P	Q6ZRF7	136 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	C8orf86	Q6ZUL3	223 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	ZNF695	Q8IW36	515 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	TCTEX1D1	Q8N7M0	179 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	TEX45	Q8NA69	505 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	OR6F1	Q8NGZ6	308 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	GRPEL2	Q8TAA5	225 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	C15orf40	Q8WUR7	153 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	DCUN1D5	Q9BTE7	237 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	FXYD6	Q9H0Q3	95 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	RBM38	Q9H0Z9	239 aa	Known RBP	11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	KLK15	Q9H2R5	256 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	KLK11	Q9UBX7	282 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	MTFP1	Q9UDX5	166 aa		11.15	□□□□□ -0.62
PSMC4-205	ENST00000601194	FOXA2	Q9Y261	457 aa	Predicted RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms