RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 HDHD3Q9BSH5 251 aaPredicted RBP13.34□□□□□ -0.27
SSBP4-207ENST00000600244 AUNIPQ9H7T9 357 aa13.34□□□□□ -0.27
SSBP4-207ENST00000600244 ORC5O43913 435 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 TPPPO94811 219 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 HLA-DQB1P01920 261 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 RCC1P18754 421 aaPredicted RBP13.33□□□□□ -0.28
SSBP4-207ENST00000600244 GZMHP20718 246 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 PRR20EP86478 221 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 PRR20CP86479 221 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 PRR20DP86480 221 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 PRR20BP86481 221 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 PRR20AP86496 221 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 LTC4SQ16873 150 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 LAX1Q8IWV1 398 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 OR10A7Q8NGE5 316 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 RFESDQ8TAC1 157 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 MRGPRDQ8TDS7 321 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 CCDC107Q8WV48 283 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 RTN4IP1Q8WWV3 396 aaPredicted RBP13.33□□□□□ -0.28
SSBP4-207ENST00000600244 CMSS1Q9BQ75 279 aaKnown RBP13.33□□□□□ -0.28
SSBP4-207ENST00000600244 C12orf4Q9NQ89 552 aa13.33□□□□□ -0.28
SSBP4-207ENST00000600244 IGHV7-81A0A0B4J1V7 117 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 IZUMO1RA6ND01 250 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 TMEM235A6NFC5 223 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 SSX5O60225 188 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 GLP1RP43220 463 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 TAS2R20P59543 309 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 HMGN3Q15651 99 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 TMEM69Q5SWH9 247 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 CASTOR1Q8WTX7 329 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 Q9N2K0 584 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 PARP11Q9NR21 331 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 SIGLEC8Q9NYZ4 499 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 TRAPPC2LQ9UL33 140 aa13.32□□□□□ -0.28
SSBP4-207ENST00000600244 RGS5O15539 181 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 IGHV3-11P01762 117 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 FCGR3AP08637 254 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 CD3GP09693 182 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 SSTR5P35346 364 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 CNPY1Q3B7I2 92 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 C6orf183Q5T699 404 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 TRAT1Q6PIZ9 186 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 Q6ZS49 121 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 MOB1BQ7L9L4 216 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 LINC00311Q8N616 119 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 RHOVQ96L33 236 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 SOSTQ9BQB4 213 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 OVOL2Q9BRP0 275 aa13.31□□□□□ -0.28
SSBP4-207ENST00000600244 C6orf62Q9GZU0 229 aaPredicted RBP13.31□□□□□ -0.28
SSBP4-207ENST00000600244 HLA-DRB1P01911 266 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 PTHLHP12272 177 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 DTYMKP23919 212 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 TNFSF8P32971 234 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 ARFRP1Q13795 201 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 LCN12Q6JVE5 192 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 CNIH2Q6PI25 160 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 C5orf24Q7Z6I8 188 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 Q8N402 240 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 NUDCD2Q8WVJ2 157 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 TAF9BQ9HBM6 251 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 EXTL2Q9UBQ6 330 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 ADAM30Q9UKF2 790 aa13.3□□□□□ -0.28
SSBP4-207ENST00000600244 A0A1W2PN81 502 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 FAM25AB3EWG3 89 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 FAM25CB3EWG5 89 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 FAM25GB3EWG6 89 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 CHRNA7P36544 502 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 MECP2P51608 486 aaKnown RBP13.29□□□□□ -0.28
SSBP4-207ENST00000600244 KLF5Q13887 457 aaPredicted RBP13.29□□□□□ -0.28
SSBP4-207ENST00000600244 LINC00336Q6ZUF6 198 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 DEFB125Q8N687 156 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 OR52M1Q8NGK5 317 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 OR9G4Q8NGQ1 327 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 ARL11Q969Q4 196 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 CHMP1AQ9HD42 196 aaPredicted RBP13.29□□□□□ -0.28
SSBP4-207ENST00000600244 PLA2G2EQ9NZK7 142 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 ANAPC10Q9UM13 185 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 MGAT4AQ9UM21 535 aa13.29□□□□□ -0.28
SSBP4-207ENST00000600244 HSPG2P98160 4391 aa13.28□□□□□ -0.28
SSBP4-207ENST00000600244 HBZP02008 142 aa13.28□□□□□ -0.28
SSBP4-207ENST00000600244 CRIP2P52943 208 aaPredicted RBP13.28□□□□□ -0.28
SSBP4-207ENST00000600244 GNG2P59768 71 aa13.28□□□□□ -0.28
SSBP4-207ENST00000600244 CD81P60033 236 aa13.28□□□□□ -0.28
SSBP4-207ENST00000600244 HLA-DRB3P79483 266 aa13.28□□□□□ -0.28
SSBP4-207ENST00000600244 C8orf31Q8N9H6 132 aa13.28□□□□□ -0.28
SSBP4-207ENST00000600244 OR1L1Q8NH94 360 aa13.28□□□□□ -0.28
SSBP4-207ENST00000600244 ABHD1Q96SE0 405 aa13.28□□□□□ -0.28
SSBP4-207ENST00000600244 NEURL2Q9BR09 285 aa13.28□□□□□ -0.28
SSBP4-207ENST00000600244 KCNIP1Q9NZI2 227 aa13.28□□□□□ -0.28
SSBP4-207ENST00000600244 FOXA2Q9Y261 457 aaPredicted RBP13.28□□□□□ -0.28
SSBP4-207ENST00000600244 FBXO7Q9Y3I1 522 aa13.28□□□□□ -0.28
SSBP4-207ENST00000600244 IGKV1D-8A0A087WSZ0 117 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 A0A0J9YWU9 116 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 TRDCB7Z8K6 153 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 CSN3P07498 182 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 MRPS15P82914 257 aaKnown RBP13.27□□□□□ -0.29
SSBP4-207ENST00000600244 HTD2P86397 168 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 TNFRSF9Q07011 255 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 MMDQ15546 238 aa13.27□□□□□ -0.29
SSBP4-207ENST00000600244 TMEM30BQ3MIR4 351 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms