RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 COX6B1P14854 86 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 OMGP23515 440 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 PPP1CCP36873 323 aaKnown RBP12.51□□□□□ -0.41
VRK3-218ENST00000600031 HTD2P86397 168 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 HABP2Q14520 560 aaPredicted RBP12.51□□□□□ -0.41
VRK3-218ENST00000600031 RHEBQ15382 184 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 CRYBG3Q68DQ2 2970 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 TBC1D26Q86UD7 250 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 ZFP82Q8N141 532 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 CHODLQ9H9P2 273 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 SNRNP70P08621 437 aaKnown RBP12.5□□□□□ -0.41
VRK3-218ENST00000600031 MEOX2P50222 304 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 EFNA4P52798 201 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 RPL31P62899 125 aaKnown RBP12.5□□□□□ -0.41
VRK3-218ENST00000600031 S100A12P80511 92 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 SELENOHQ8IZQ5 122 aaKnown RBP12.5□□□□□ -0.41
VRK3-218ENST00000600031 CORO2AQ92828 525 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 GPHA2Q96T91 129 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 TOLLIPQ9H0E2 274 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 KBTBD11-OT1A0A1B0GTJ5 212 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 FAM24AA6NFZ4 105 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 M0R036 132 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 FHITP49789 147 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 VAMP2P63027 116 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 ETV3LQ6ZN32 361 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 TMEM182Q6ZP80 229 aaPredicted RBP12.5□□□□□ -0.41
VRK3-218ENST00000600031 FAM213BQ8TBF2 198 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 H1FXQ92522 213 aaKnown RBP12.5□□□□□ -0.41
VRK3-218ENST00000600031 RAB1CQ92928 201 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 CLN8Q9UBY8 286 aa12.5□□□□□ -0.41
VRK3-218ENST00000600031 PIGBOS1A0A0B4J2F0 54 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 hADV38S2A0JD32 116 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 BTBD17A6NE02 478 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 J3QKU1 62 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 F2RL2O00254 374 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 IGLV2-14P01704 120 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 LOXL3P58215 753 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 ZNF841Q6ZN19 808 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 NINJ1Q92982 152 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 IL22RA2Q969J5 263 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 TIMD4Q96H15 378 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 LYRM2Q9NU23 88 aaPredicted RBP12.49□□□□□ -0.41
VRK3-218ENST00000600031 RBM7Q9Y580 266 aaKnown RBP12.49□□□□□ -0.41
VRK3-218ENST00000600031 LINC00312Q9Y6C7 94 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 IGSF23A1L1A6 192 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 UCP1P25874 307 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 COL8A1P27658 744 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 POLR2GP62487 172 aaKnown RBP eCLIP12.49□□□□□ -0.41
VRK3-218ENST00000600031 MEF2CQ06413 473 aaPredicted RBP12.49□□□□□ -0.41
VRK3-218ENST00000600031 UTF1Q5T230 341 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 TMEM200BQ69YZ2 307 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 ZNF295-AS1Q8N0V1 137 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 TMEM252Q8N6L7 170 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 OR2G3Q8NGZ4 309 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 CCL19Q99731 98 aa12.49□□□□□ -0.41
VRK3-218ENST00000600031 YLPM1P49750 1951 aaKnown RBP12.48□□□□□ -0.41
VRK3-218ENST00000600031 DOCK11Q5JSL3 2073 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 ZNF729A6NN14 1252 aaPredicted RBP12.48□□□□□ -0.41
VRK3-218ENST00000600031 TNFSF12O43508 249 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 MMP23AO75900 390 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 VDAC1P21796 283 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 ATP6V0CP27449 155 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 AKR1C3P42330 323 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 CTAG1AP78358 180 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 BAXQ07812 192 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 CLINT1Q14677 625 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 TMEM155Q4W5P6 130 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 MORN2Q502X0 79 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 LINC00574Q9H8X3 128 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 GNG12Q9UBI6 72 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 JPT1Q9UK76 154 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 RNF150Q9ULK6 438 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 FBXO7Q9Y3I1 522 aa12.48□□□□□ -0.41
VRK3-218ENST00000600031 C5orf52A6NGY3 159 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 IGHV3-7P01780 117 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 S100A8P05109 93 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 S100A6P06703 90 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 CCL3L1P16619 93 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 ERVFRD-1P60508 538 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 ID3Q02535 119 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 CMTM1Q8IZ96 169 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 GNPNAT1Q96EK6 184 aaPredicted RBP12.47□□□□□ -0.41
VRK3-218ENST00000600031 UNKLQ9H9P5 680 aaKnown RBP12.47□□□□□ -0.41
VRK3-218ENST00000600031 MALRD1Q5VYJ5 2156 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 TACC2O95359 2948 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 YPEL1O60688 119 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 PGLYRP1O75594 196 aaPredicted RBP12.47□□□□□ -0.41
VRK3-218ENST00000600031 WNT2P09544 360 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 S100GP29377 79 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 SNRPEP62304 92 aaKnown RBP12.47□□□□□ -0.41
VRK3-218ENST00000600031 NMSQ5H8A3 153 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 CD300LFQ8TDQ1 290 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 MALSU1Q96EH3 234 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 YPEL2Q96QA6 119 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 GFOD1Q9NXC2 390 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 IDI2-AS1Q9NZ38 188 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 MIOXQ9UGB7 285 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 KCNS2Q9ULS6 477 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 TENM4Q6N022 2769 aa12.47□□□□□ -0.41
VRK3-218ENST00000600031 USP9YO00507 2555 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms