RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 LINC00473A8K010 186 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 IAPPP10997 89 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 SELLP14151 372 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 DAOP14920 347 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 NDUFB7P17568 137 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 IZUMO4Q1ZYL8 232 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 LRRC10Q5BKY1 277 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 OR2B11Q5JQS5 317 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 FAM53AQ6NSI3 398 aaPredicted RBP9.31□□□□□ -0.92
LIG3-204ENST00000585740 ODF3L1Q8IXM7 274 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 FAM216BQ8N7L0 139 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 OR4S2Q8NH73 311 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 SUN5Q8TC36 379 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 RBKSQ9H477 322 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 PLA2G2EQ9NZK7 142 aa9.31□□□□□ -0.92
LIG3-204ENST00000585740 DIDO1Q9BTC0 2240 aaKnown RBP9.3□□□□□ -0.92
LIG3-204ENST00000585740 MARCH11A6NNE9 402 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 TMPRSS2O15393 492 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 NDUFB3O43676 98 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 ZG16O60844 167 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 FCGR3BO75015 233 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 FSTL3O95633 263 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 APOC3P02656 99 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 NQO2P16083 231 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 DVL1P1P54792 670 aaPredicted RBP9.3□□□□□ -0.92
LIG3-204ENST00000585740 BRWD1-AS2P59051 145 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 RAB2AP61019 212 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 RPP30P78346 268 aaKnown RBP9.3□□□□□ -0.92
LIG3-204ENST00000585740 MRPS11P82912 194 aaKnown RBP9.3□□□□□ -0.92
LIG3-204ENST00000585740 TMEM267Q0VDI3 215 aaPredicted RBP9.3□□□□□ -0.92
LIG3-204ENST00000585740 PEA15Q15121 130 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 AKR1C8PQ5T2L2 129 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 NCR3LG1Q68D85 454 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 TMEM14EPQ6UXP3 125 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 TMEM182Q6ZP80 229 aaPredicted RBP9.3□□□□□ -0.92
LIG3-204ENST00000585740 ZNF295-AS1Q8N0V1 137 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 LILRB2Q8N423 598 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 TMEM217Q8N7C4 229 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 OR52E5Q8NH55 327 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 CLCC1Q96S66 551 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 PSMG3Q9BT73 122 aaPredicted RBP9.3□□□□□ -0.92
LIG3-204ENST00000585740 PBDC1Q9BVG4 233 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 KAAG1Q9UBP8 84 aa9.3□□□□□ -0.92
LIG3-204ENST00000585740 RPUSD1Q9UJJ7 312 aaKnown RBP9.3□□□□□ -0.92
LIG3-204ENST00000585740 ARFGEF3Q5TH69 2177 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 A0A1B0GW64 132 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 RNASEK-C17orf49H0YIS7 233 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 H3BP45 60 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 TNFRSF13BO14836 293 aaPredicted RBP9.29□□□□□ -0.92
LIG3-204ENST00000585740 RBMXL2O75526 392 aaKnown RBP9.29□□□□□ -0.92
LIG3-204ENST00000585740 HBE1P02100 147 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 RPL31P62899 125 aaKnown RBP9.29□□□□□ -0.92
LIG3-204ENST00000585740 ADORA2A-AS1P86434 159 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 ZNF616Q08AN1 781 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 AARDQ4LEZ3 155 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 CT45A1Q5HYN5 189 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 SPANXN5Q5MJ07 72 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 C10orf91Q5T1B1 145 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 TCF23Q7RTU1 214 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 SVBPQ8N300 66 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 ZNF525Q8N782 197 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 ZNF439Q8NDP4 499 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 OR4A16Q8NH70 328 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 CT45A3Q8NHU0 189 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 LINC01560Q8TB33 94 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 CA5BP1Q8WTZ4 195 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 DDB2Q92466 427 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 CCL17Q92583 94 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 AIFM2Q9BRQ8 373 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 SEC11CQ9BY50 192 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 SH3BGRL3Q9H299 93 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 SMDT1Q9H4I9 107 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 UQCC1Q9NVA1 299 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 CISD1Q9NZ45 108 aaKnown RBP9.29□□□□□ -0.92
LIG3-204ENST00000585740 CARHSP1Q9Y2V2 147 aaKnown RBP9.29□□□□□ -0.92
LIG3-204ENST00000585740 NBASA2RRP1 2371 aa9.29□□□□□ -0.92
LIG3-204ENST00000585740 ANKRD17O75179 2603 aaKnown RBP9.29□□□□□ -0.92
LIG3-204ENST00000585740 YLPM1P49750 1951 aaKnown RBP9.28□□□□□ -0.92
LIG3-204ENST00000585740 IGHV1-69-2A0A0G2JMI3 117 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 CEBPZOSA8MTT3 80 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 F8W036 122 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 CD5P06127 495 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 METTL15P1P0C7V9 234 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 NFYBP25208 207 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 SNCAP37840 140 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 PPOXP50336 477 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 ZNF134P52741 427 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 SPCS3P61009 180 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 TAGLNQ01995 201 aaKnown RBP9.28□□□□□ -0.92
LIG3-204ENST00000585740 TLE4Q04727 773 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 SLC38A11Q08AI6 406 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 HFEQ30201 348 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 ZNF672Q499Z4 452 aaPredicted RBP9.28□□□□□ -0.92
LIG3-204ENST00000585740 PRAMEF5Q5TYX0 476 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 DHRS7BQ6IAN0 325 aaPredicted RBP9.28□□□□□ -0.92
LIG3-204ENST00000585740 FAM71F2Q6NXP2 309 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 DUX4L9Q6RFH8 374 aaPredicted RBP9.28□□□□□ -0.92
LIG3-204ENST00000585740 HEPN1Q6WQI6 88 aa9.28□□□□□ -0.92
LIG3-204ENST00000585740 SLC25A48Q6ZT89 311 aaKnown RBP9.28□□□□□ -0.92
LIG3-204ENST00000585740 C8orf31Q8N9H6 132 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms