RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 IL3RAP26951 378 aa13.76□□□□□ -0.21
TOP3A-220ENST00000585031 C5orf64Q2M2E5 130 aa13.76□□□□□ -0.21
TOP3A-220ENST00000585031 TOMM5Q8N4H5 51 aa13.76□□□□□ -0.21
TOP3A-220ENST00000585031 RPP25LQ8N5L8 163 aaKnown RBP13.76□□□□□ -0.21
TOP3A-220ENST00000585031 KCNG3Q8TAE7 436 aa13.76□□□□□ -0.21
TOP3A-220ENST00000585031 GATAD1Q8WUU5 269 aa13.76□□□□□ -0.21
TOP3A-220ENST00000585031 CYYR1Q96J86 154 aa13.76□□□□□ -0.21
TOP3A-220ENST00000585031 C11orf54Q9H0W9 315 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-220ENST00000585031 CST11Q9H112 138 aa13.76□□□□□ -0.21
TOP3A-220ENST00000585031 TUBA4BQ9H853 241 aa13.76□□□□□ -0.21
TOP3A-220ENST00000585031 PLA2G10O15496 165 aa13.75□□□□□ -0.21
TOP3A-220ENST00000585031 KCNJ3P48549 501 aa13.75□□□□□ -0.21
TOP3A-220ENST00000585031 CRIP2P52943 208 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-220ENST00000585031 GLIPR1L1Q6UWM5 242 aa13.75□□□□□ -0.21
TOP3A-220ENST00000585031 C5orf24Q7Z6I8 188 aa13.75□□□□□ -0.21
TOP3A-220ENST00000585031 OR10V1Q8NGI7 309 aa13.75□□□□□ -0.21
TOP3A-220ENST00000585031 RHOVQ96L33 236 aa13.75□□□□□ -0.21
TOP3A-220ENST00000585031 MS4A10Q96PG2 267 aa13.75□□□□□ -0.21
TOP3A-220ENST00000585031 ELOVL1Q9BW60 279 aa13.75□□□□□ -0.21
TOP3A-220ENST00000585031 KCNK15Q9H427 330 aa13.75□□□□□ -0.21
TOP3A-220ENST00000585031 NUBP2Q9Y5Y2 271 aa13.75□□□□□ -0.21
TOP3A-220ENST00000585031 TRAV18A0A075B6X5 111 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 FAM240BA0A1B0GVZ2 78 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 SULT1C2O00338 296 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 FCN1O00602 326 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 TXNL1O43396 289 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 RGS11O94810 467 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 CD3GP09693 182 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 PRSS3P35030 304 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 SSBP1Q04837 148 aaKnown RBP13.74□□□□□ -0.21
TOP3A-220ENST00000585031 DYRK1AQ13627 763 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 RNASE12Q5GAN4 147 aaKnown RBP13.74□□□□□ -0.21
TOP3A-220ENST00000585031 LIN54Q6MZP7 749 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 NRARPQ7Z6K4 114 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 ODF3L1Q8IXM7 274 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 PXT1Q8NFP0 134 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 TNFAIP8L1Q8WVP5 186 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 FLYWCH2Q96CP2 140 aaKnown RBP13.74□□□□□ -0.21
TOP3A-220ENST00000585031 URM1Q9BTM9 101 aaKnown RBP13.74□□□□□ -0.21
TOP3A-220ENST00000585031 SCPEP1Q9HB40 452 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 GAB2Q9UQC2 676 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 FOXA2Q9Y261 457 aaPredicted RBP13.74□□□□□ -0.21
TOP3A-220ENST00000585031 DNAH6Q9C0G6 4158 aa13.74□□□□□ -0.21
TOP3A-220ENST00000585031 TMEM30CPA0ZSE6 113 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 TMEM14DPA8MWL7 114 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 NBR2O15453 112 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 LANCL1O43813 399 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 ORC5O43913 435 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 MT-ND4P03905 459 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 RFX2P48378 723 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 BCAP31P51572 246 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 QRFPP83859 136 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 PLA2G7Q13093 441 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 GPR176Q14439 515 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 PLET1Q6UQ28 207 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 ASCL4Q6XD76 172 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 OR52I2Q8NH67 350 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 OR1L1Q8NH94 360 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 DEDD2Q8WXF8 326 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 TMEM59Q9BXS4 323 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 MRPL20Q9BYC9 149 aaKnown RBP13.73□□□□□ -0.21
TOP3A-220ENST00000585031 TAS2R8Q9NYW2 309 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 ING4Q9UNL4 249 aa13.73□□□□□ -0.21
TOP3A-220ENST00000585031 FAT2Q9NYQ8 4349 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 NAP1L6A6NFF2 107 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 RBBP9O75884 186 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 NDUFA3O95167 84 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 HTR3BO95264 441 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 FAUP35544 74 aaKnown RBP13.72□□□□□ -0.21
TOP3A-220ENST00000585031 CX3CL1P78423 397 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 Q3ZCU0 254 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 NPBQ8NG41 125 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 PPP1R14BQ96C90 147 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 ZNF251Q9BRH9 671 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 FAM103A1Q9BTL3 118 aaKnown RBP13.72□□□□□ -0.21
TOP3A-220ENST00000585031 METTL9Q9H1A3 318 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 AUNIPQ9H7T9 357 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 IFT22Q9H7X7 185 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 PLEKHA3Q9HB20 300 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 ST3GAL6Q9Y274 331 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 RBMX2Q9Y388 322 aaKnown RBP13.72□□□□□ -0.21
TOP3A-220ENST00000585031 ABCA13Q86UQ4 5058 aa13.72□□□□□ -0.21
TOP3A-220ENST00000585031 GEMIN2O14893 280 aaKnown RBP13.71□□□□□ -0.21
TOP3A-220ENST00000585031 CRTAPO75718 401 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-220ENST00000585031 UNC119Q13432 240 aa13.71□□□□□ -0.21
TOP3A-220ENST00000585031 KLF5Q13887 457 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-220ENST00000585031 OR10K2Q6IF99 312 aa13.71□□□□□ -0.21
TOP3A-220ENST00000585031 ZNF497Q6ZNH5 498 aa13.71□□□□□ -0.21
TOP3A-220ENST00000585031 DUSP18Q8NEJ0 188 aa13.71□□□□□ -0.21
TOP3A-220ENST00000585031 OR56B1Q8NGI3 324 aa13.71□□□□□ -0.21
TOP3A-220ENST00000585031 COPZ2Q9P299 210 aa13.71□□□□□ -0.21
TOP3A-220ENST00000585031 PKHD1P08F94 4074 aa13.7□□□□□ -0.22
TOP3A-220ENST00000585031 DNAH2Q9P225 4427 aa13.7□□□□□ -0.22
TOP3A-220ENST00000585031 ZNF780AO75290 641 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-220ENST00000585031 OR7C1O76099 320 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-220ENST00000585031 KLF9Q13886 244 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-220ENST00000585031 GNMTQ14749 295 aa13.7□□□□□ -0.22
TOP3A-220ENST00000585031 ARL6IP1Q15041 203 aa13.7□□□□□ -0.22
TOP3A-220ENST00000585031 RSU1Q15404 277 aa13.7□□□□□ -0.22
TOP3A-220ENST00000585031 SLC22A6Q4U2R8 563 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms