RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 FP248Q71RG6 208 aaPredicted RBP0.76□□□□□ -2.29
SKA2-210ENST00000584089 KTN1-AS1Q86SY8 53 aa0.76□□□□□ -2.29
SKA2-210ENST00000584089 BLIDQ8IZY5 108 aa0.76□□□□□ -2.29
SKA2-210ENST00000584089 OR51T1Q8NGJ9 327 aa0.76□□□□□ -2.29
SKA2-210ENST00000584089 OR1L8Q8NGR8 309 aa0.76□□□□□ -2.29
SKA2-210ENST00000584089 ZNF75CPQ92670 426 aaPredicted RBP0.76□□□□□ -2.29
SKA2-210ENST00000584089 RNASE6Q93091 150 aaKnown RBP0.76□□□□□ -2.29
SKA2-210ENST00000584089 SFRP2Q96HF1 295 aa0.76□□□□□ -2.29
SKA2-210ENST00000584089 MED9Q9NWA0 146 aa0.76□□□□□ -2.29
SKA2-210ENST00000584089 PTPRSQ13332 1948 aa0.76□□□□□ -2.29
SKA2-210ENST00000584089 SIPA1L1O43166 1804 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 A0A087WUU8 490 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 DAPL1A0PJW8 107 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 CIAO1O76071 339 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 CRPP02741 224 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 ATP5G1P05496 136 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 LINC00614P0C842 121 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 CCR7P32248 378 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 CCR2P41597 374 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 CDK9P50750 372 aaKnown RBP0.75□□□□□ -2.29
SKA2-210ENST00000584089 TMEM33P57088 247 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 TBPL1P62380 186 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 PLCXD2Q0VAA5 305 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 FAM45BPQ6NSW5 357 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 OR13C8Q8NGS7 320 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 HEATR5BQ9P2D3 2071 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 POLEQ07864 2286 aa0.75□□□□□ -2.29
SKA2-210ENST00000584089 TECTAO75443 2155 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 OR6C6A6NF89 314 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 METTL15A6NJ78 407 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 HMSDA8MTL9 139 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 MT-CO2P00403 227 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 PSMB8P28062 276 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 FXYD7P58549 80 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 MIAQ16674 131 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 LRRC26Q2I0M4 334 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 ZNF675Q8TD23 568 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 PPCDCQ96CD2 204 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 NMNAT3Q96T66 252 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 MROQ9BYG7 248 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 C1orf109Q9NX04 203 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 CHMP5Q9NZZ3 219 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 ARFGEF3Q5TH69 2177 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 AHNAK2Q8IVF2 5795 aa0.74□□□□□ -2.29
SKA2-210ENST00000584089 IGHV1-18A0A0C4DH31 117 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 MKRN2OSH3BPM6 223 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 MIPP30301 263 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 CA5AP35218 305 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 ETV1P50549 477 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 TAS2R20P59543 309 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 TPI1P60174 286 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 FKBP1AP62942 108 aaKnown RBP0.73□□□□□ -2.29
SKA2-210ENST00000584089 HPCAP84074 193 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 FABP5Q01469 135 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 SLAMF1Q13291 335 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 GNA13Q14344 377 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 ZNF705AQ6ZN79 300 aaPredicted RBP0.73□□□□□ -2.29
SKA2-210ENST00000584089 RPS19BP1Q86WX3 136 aaKnown RBP0.73□□□□□ -2.29
SKA2-210ENST00000584089 OR10D3Q8NH80 312 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 MBD3L1Q8WWY6 194 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 LRRC45Q96CN5 670 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 RBP7Q96R05 134 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 MED10Q9BTT4 135 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 TTTY13Q9BZ97 58 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 OR52A5Q9H2C5 316 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 HDGFL3Q9Y3E1 203 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 TIMM9Q9Y5J7 89 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 PCYT1BQ9Y5K3 369 aaPredicted RBP0.73□□□□□ -2.29
SKA2-210ENST00000584089 NAV1Q8NEY1 1877 aa0.73□□□□□ -2.29
SKA2-210ENST00000584089 RIMS2Q9UQ26 1411 aa0.72□□□□□ -2.29
SKA2-210ENST00000584089 LRPPRCP42704 1394 aaKnown RBP0.72□□□□□ -2.29
SKA2-210ENST00000584089 A0A0J9YW62 118 aa0.72□□□□□ -2.29
SKA2-210ENST00000584089 RPSAP08865 295 aaKnown RBP0.72□□□□□ -2.29
SKA2-210ENST00000584089 ALDH3A1P30838 453 aa0.72□□□□□ -2.29
SKA2-210ENST00000584089 AP1S1P61966 158 aa0.72□□□□□ -2.29
SKA2-210ENST00000584089 SMAGPQ0VAQ4 97 aa0.72□□□□□ -2.29
SKA2-210ENST00000584089 CDK5R1Q15078 307 aa0.72□□□□□ -2.29
SKA2-210ENST00000584089 ZNHIT3Q15649 155 aaPredicted RBP0.72□□□□□ -2.29
SKA2-210ENST00000584089 C4orf26Q17RF5 130 aa0.72□□□□□ -2.29
SKA2-210ENST00000584089 Q1T7F1 81 aa0.72□□□□□ -2.29
SKA2-210ENST00000584089 C7orf65Q6ZTY9 151 aa0.72□□□□□ -2.29
SKA2-210ENST00000584089 SLC36A1Q7Z2H8 476 aa0.72□□□□□ -2.29
SKA2-210ENST00000584089 CRLF3Q8IUI8 442 aa0.72□□□□□ -2.29
SKA2-210ENST00000584089 C12orf43Q96C57 262 aaKnown RBP0.72□□□□□ -2.29
SKA2-210ENST00000584089 TMA16Q96EY4 203 aaKnown RBP0.72□□□□□ -2.29
SKA2-210ENST00000584089 ADAT1Q9BUB4 502 aaKnown RBP0.72□□□□□ -2.29
SKA2-210ENST00000584089 ABCC12Q96J65 1359 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 TRAPPC13A5PLN9 417 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 C9JCJ5 164 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 H7C2G1 150 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 K7ERQ8 282 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 YKT6O15498 198 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 GRPRP30550 384 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 EVX1P49640 407 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 CTAG1AP78358 180 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 EBPQ15125 230 aaKnown RBP0.71□□□□□ -2.3
SKA2-210ENST00000584089 MOGQ16653 247 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 HLA-DRB5Q30154 266 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 PACRGLQ8N7B6 248 aa0.71□□□□□ -2.3
SKA2-210ENST00000584089 SPERTQ8NA61 448 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms