RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 DDB2Q92466 427 aa9.38□□□□□ -0.91
CDRT1-207ENST00000583965 ST6GAL2Q96JF0 529 aa9.38□□□□□ -0.91
CDRT1-207ENST00000583965 ZNF48Q96MX3 618 aaPredicted RBP9.38□□□□□ -0.91
CDRT1-207ENST00000583965 SSX3Q99909 188 aa9.38□□□□□ -0.91
CDRT1-207ENST00000583965 SLC35D1Q9NTN3 355 aa9.38□□□□□ -0.91
CDRT1-207ENST00000583965 LIN7CQ9NUP9 197 aaKnown RBP9.38□□□□□ -0.91
CDRT1-207ENST00000583965 WASHC3Q9Y3C0 194 aa9.38□□□□□ -0.91
CDRT1-207ENST00000583965 SOX21Q9Y651 276 aaPredicted RBP9.38□□□□□ -0.91
CDRT1-207ENST00000583965 ZFHX3Q15911 3703 aa9.38□□□□□ -0.91
CDRT1-207ENST00000583965 TNCP24821 2201 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 MDFIC2A0A1B0GVS7 189 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 BTBD17A6NE02 478 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 CRYM-AS1A6NIL9 109 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 RBFOX2O43251 390 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDRT1-207ENST00000583965 TNFSF12O43508 249 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 CCNKO75909 580 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 VENTXO95231 258 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 FAM106CPP0CH98 169 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 F2RP25116 425 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 PAX6P26367 422 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 IER3P46695 156 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 RPL30P62888 115 aaKnown RBP9.37□□□□□ -0.91
CDRT1-207ENST00000583965 EBI3Q14213 229 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 TMEM128Q5BJH2 165 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 TBC1D26Q86UD7 250 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 TCTE3Q8IZS6 198 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 TMEM86BQ8N661 226 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 SIGLECL1Q8N7X8 197 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 OR51H1Q8NH63 302 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 ZNF418Q8TF45 676 aaPredicted RBP9.37□□□□□ -0.91
CDRT1-207ENST00000583965 SSMEM1Q8WWF3 244 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 RNF5Q99942 180 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 SEC22CQ9BRL7 303 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 PITPNC1Q9UKF7 332 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 POMT1Q9Y6A1 747 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 PLXNB1O43157 2135 aa9.37□□□□□ -0.91
CDRT1-207ENST00000583965 TEX13DA0A0J9YY54 714 aaPredicted RBP9.36□□□□□ -0.91
CDRT1-207ENST00000583965 H3BUX3 64 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 H7C2Y5 167 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 MOSP00540 346 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 SNRNP70P08621 437 aaKnown RBP9.36□□□□□ -0.91
CDRT1-207ENST00000583965 DHRS2Q13268 280 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 FCN2Q15485 313 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 TMED4Q7Z7H5 227 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 LYG2Q86SG7 212 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 SGPP2Q8IWX5 399 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 OR4C13Q8NGP0 309 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 OR2T10Q8NGZ9 312 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 OR4S2Q8NH73 311 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 PIFOQ8TCI5 191 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 CAPSLQ8WWF8 208 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 ASB13Q8WXK3 278 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 TMEM230Q96A57 120 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 JMJD8Q96S16 334 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 GPHA2Q96T91 129 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 NAA60Q9H7X0 242 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 BEX1Q9HBH7 125 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 KCNIP3Q9Y2W7 256 aa9.36□□□□□ -0.91
CDRT1-207ENST00000583965 IGHV3-72A0A0B4J1Y9 119 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 A0A0B4J2A0 478 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 C3orf85A0A1B0GTC6 90 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 C9orf170A2RU37 121 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 H0Y980 276 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 SSNA1O43805 119 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 FCGR3BO75015 233 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 IGKV1D-33P01593 117 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 IGKV1-33P01594 117 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 HNRNPCP07910 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDRT1-207ENST00000583965 RPA2P15927 270 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 AKR1C4P17516 323 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 LINC00205P59089 165 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 CD300CQ08708 224 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 HES1Q14469 280 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 C4orf46Q504U0 113 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 TMEM177Q53S58 311 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 LIAT1Q6ZQX7 453 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 C16orf82Q7Z2V1 217 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 SPAG16Q8N0X2 631 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 ADAD2Q8NCV1 583 aaKnown RBP9.35□□□□□ -0.91
CDRT1-207ENST00000583965 OR11H7Q8NGC8 314 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 OSR1Q8TAX0 266 aaPredicted RBP9.35□□□□□ -0.91
CDRT1-207ENST00000583965 MITD1Q8WV92 249 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 FLYWCH2Q96CP2 140 aaKnown RBP9.35□□□□□ -0.91
CDRT1-207ENST00000583965 GALNT14Q96FL9 552 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 AIFM2Q9BRQ8 373 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 SHPKQ9UHJ6 478 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 TCF19Q9Y242 345 aa9.35□□□□□ -0.91
CDRT1-207ENST00000583965 PIGBOS1A0A0B4J2F0 54 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 HOXA3O43365 443 aaPredicted RBP9.34□□□□□ -0.91
CDRT1-207ENST00000583965 DUS4LO95620 317 aaKnown RBP9.34□□□□□ -0.91
CDRT1-207ENST00000583965 CRYZL1O95825 349 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 HPRT1P00492 218 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 IGHV4-59P01825 116 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 IGKV1-16P04430 117 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 ANXA3P12429 323 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 TMEM11P17152 192 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 HLA-GP17693 338 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 LGALS7P47929 136 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 BRWD1-AS2P59051 145 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 PPP1R1AQ13522 171 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms