RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 TMEM155Q4W5P6 130 aa12□□□□□ -0.49
MKS1-211ENST00000581761 C1orf229Q6ZS94 237 aaPredicted RBP12□□□□□ -0.49
MKS1-211ENST00000581761 SLC25A48Q6ZT89 311 aaKnown RBP12□□□□□ -0.49
MKS1-211ENST00000581761 H2BFWTQ7Z2G1 175 aa12□□□□□ -0.49
MKS1-211ENST00000581761 ODF3L1Q8IXM7 274 aa12□□□□□ -0.49
MKS1-211ENST00000581761 OR8B3Q8NGG8 313 aa12□□□□□ -0.49
MKS1-211ENST00000581761 R3HDM4Q96D70 268 aa12□□□□□ -0.49
MKS1-211ENST00000581761 ADTRPQ96IZ2 230 aa12□□□□□ -0.49
MKS1-211ENST00000581761 OR8B2Q96RD0 313 aa12□□□□□ -0.49
MKS1-211ENST00000581761 RAB40CQ96S21 281 aa12□□□□□ -0.49
MKS1-211ENST00000581761 LYRM2Q9NU23 88 aaPredicted RBP12□□□□□ -0.49
MKS1-211ENST00000581761 COA4Q9NYJ1 87 aa12□□□□□ -0.49
MKS1-211ENST00000581761 BORCS7-ASMTA0A0B4J1R7 106 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 FAM90A26D6RGX4 464 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 RBFOX2O43251 390 aaKnown RBP eCLIP11.99□□□□□ -0.49
MKS1-211ENST00000581761 SYNGR2O43760 224 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 IAPPP10997 89 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 CDKN1AP38936 164 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 NHLH2Q02577 135 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 TLE4Q04727 773 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 MIDNQ504T8 468 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 PDZD9Q8IXQ8 264 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 TMEM252Q8N6L7 170 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 NEIL1Q96FI4 390 aaPredicted RBP11.99□□□□□ -0.49
MKS1-211ENST00000581761 CXorf58Q96LI9 332 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 ZNF251Q9BRH9 671 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 WFDC1Q9HC57 220 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.99□□□□□ -0.49
MKS1-211ENST00000581761 MIOXQ9UGB7 285 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 ABCA4P78363 2273 aa11.99□□□□□ -0.49
MKS1-211ENST00000581761 ANKRD17O75179 2603 aaKnown RBP11.99□□□□□ -0.49
MKS1-211ENST00000581761 LEUTXA8MZ59 168 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 JTBO76095 146 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 TMEM50AO95807 157 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 PAX9P55771 341 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 ERVK-16P61578 105 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 ZNF841Q6ZN19 808 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 OR4S2Q8NH73 311 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 DDB2Q92466 427 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 CITED4Q96RK1 184 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 CHODLQ9H9P2 273 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 AUP1Q9Y679 476 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 CCDC168Q8NDH2 2452 aa11.98□□□□□ -0.49
MKS1-211ENST00000581761 MARCH11A6NNE9 402 aa11.97□□□□□ -0.49
MKS1-211ENST00000581761 GPR37O15354 613 aa11.97□□□□□ -0.49
MKS1-211ENST00000581761 MED6O75586 246 aa11.97□□□□□ -0.49
MKS1-211ENST00000581761 BAXQ07812 192 aa11.97□□□□□ -0.49
MKS1-211ENST00000581761 ZNF383Q8NA42 475 aa11.97□□□□□ -0.49
MKS1-211ENST00000581761 TMED6Q8WW62 240 aa11.97□□□□□ -0.49
MKS1-211ENST00000581761 RBKSQ9H477 322 aa11.97□□□□□ -0.49
MKS1-211ENST00000581761 PSENENQ9NZ42 101 aa11.97□□□□□ -0.49
MKS1-211ENST00000581761 ZNRD1Q9P1U0 126 aa11.97□□□□□ -0.49
MKS1-211ENST00000581761 SESN1Q9Y6P5 492 aa11.97□□□□□ -0.49
MKS1-211ENST00000581761 YLPM1P49750 1951 aaKnown RBP11.96□□□□□ -0.49
MKS1-211ENST00000581761 A0A1W2PPH5 198 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 ANKRD34BA5PLL1 514 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 H3BP45 60 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 RBMXL2O75526 392 aaKnown RBP11.96□□□□□ -0.49
MKS1-211ENST00000581761 OR9G9P0C7N8 305 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 IGHV1-8P0DP01 117 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 NQO2P16083 231 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 DYNLT3P51808 116 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 UBE2KP61086 200 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 TNFRSF9Q07011 255 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 TMEM267Q0VDI3 215 aaPredicted RBP11.96□□□□□ -0.49
MKS1-211ENST00000581761 WDR25Q64LD2 544 aaPredicted RBP11.96□□□□□ -0.49
MKS1-211ENST00000581761 EIF5AL1Q6IS14 154 aaKnown RBP11.96□□□□□ -0.49
MKS1-211ENST00000581761 ZNF833PQ6ZTB9 187 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 SSX9Q7RTT3 188 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 STX12Q86Y82 276 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 LINC00311Q8N616 119 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 C8orf31Q8N9H6 132 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 OR10X1Q8NGY0 326 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 LRRC20Q8TCA0 184 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 SMIM8Q96KF7 97 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 FAM210AQ96ND0 272 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 HSPB7Q9UBY9 170 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 PFDN2Q9UHV9 154 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 WSB1Q9Y6I7 421 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 USF3Q68DE3 2245 aa11.96□□□□□ -0.49
MKS1-211ENST00000581761 HRNRQ86YZ3 2850 aaPredicted RBP11.95□□□□□ -0.5
MKS1-211ENST00000581761 FAM90A9PA6NNJ1 464 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 J3QR06 171 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 TXNL1O43396 289 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 CST7O76096 145 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 GOSR1O95249 250 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 CRYZL1O95825 349 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 CT45A6P0DMU7 189 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 CT45A5P0DMU8 189 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 CT45A7P0DMV0 189 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 RRASP10301 218 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 GPR6P46095 362 aaPredicted RBP11.95□□□□□ -0.5
MKS1-211ENST00000581761 ARHGDIBP52566 201 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 CLINT1Q14677 625 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 UBAC2Q8NBM4 344 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 OR1S2Q8NGQ3 325 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 OR9G1Q8NH87 305 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 ZNF596Q8TC21 504 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 ARV1Q9H2C2 271 aa11.95□□□□□ -0.5
MKS1-211ENST00000581761 PATZ1Q9HBE1 687 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms