RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 ZNF880Q6PDB4 577 aa9.8□□□□□ -0.84
CDK5RAP3-213ENST00000579605 Q6ZWC4 215 aa9.8□□□□□ -0.84
CDK5RAP3-213ENST00000579605 LRRTM1Q86UE6 522 aa9.8□□□□□ -0.84
CDK5RAP3-213ENST00000579605 EDARADDQ8WWZ3 215 aa9.8□□□□□ -0.84
CDK5RAP3-213ENST00000579605 PHYHIPQ92561 330 aa9.8□□□□□ -0.84
CDK5RAP3-213ENST00000579605 RNF5Q99942 180 aa9.8□□□□□ -0.84
CDK5RAP3-213ENST00000579605 NICN1Q9BSH3 213 aa9.8□□□□□ -0.84
CDK5RAP3-213ENST00000579605 RIMS4Q9H426 269 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-213ENST00000579605 ZC4H2Q9NQZ6 224 aa9.8□□□□□ -0.84
CDK5RAP3-213ENST00000579605 PLCXD1Q9NUJ7 323 aa9.8□□□□□ -0.84
CDK5RAP3-213ENST00000579605 COA4Q9NYJ1 87 aa9.8□□□□□ -0.84
CDK5RAP3-213ENST00000579605 C2orf70A6NJV1 201 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 M0R2N4 97 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 BMPR1BO00238 502 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 ITGB1BP1O14713 200 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 GNAO1P09471 354 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 APELAP0DMC3 54 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 CPEP16870 476 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 ZBTB25P24278 435 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 CEACAM6P40199 344 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 APOC4P55056 127 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 UNC119Q13432 240 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 HSD17B12Q53GQ0 312 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 TM4SF20Q53R12 229 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 LAIR2Q6ISS4 152 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 CEACAM19Q7Z692 300 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 GVQW1Q8N7I0 195 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 MAPKAPK5-AS1Q8N8E1 139 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 OR5AN1Q8NGI8 311 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 C11orf45Q8TAV5 145 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 CACNG8Q8WXS5 425 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 TSNAXQ99598 290 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 URM1Q9BTM9 101 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 MND1Q9BWT6 205 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 TINAGL1Q9GZM7 467 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 C11orf54Q9H0W9 315 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 KCNK15Q9H427 330 aa9.79□□□□□ -0.84
CDK5RAP3-213ENST00000579605 TMEM14DPA8MWL7 114 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 SLC22A1O15245 554 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 RTL8CO15255 209 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 RBMXL2O75526 392 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 BPNT1O95861 308 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 SRMP19623 302 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 LGALS7P47929 136 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 HLA-DRB3P79483 266 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 TMEM61Q8N0U2 210 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 OR6M1Q8NGM8 313 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 USMG5Q96IX5 58 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 HDHD3Q9BSH5 251 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 TECRQ9NZ01 308 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 OR1A1Q9P1Q5 309 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 AK3Q9UIJ7 227 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 ZNF221Q9UK13 617 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 APLNQ9ULZ1 77 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 MGAT4AQ9UM21 535 aa9.78□□□□□ -0.84
CDK5RAP3-213ENST00000579605 A0A0A6YYD4 124 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 TRBV6-6A0A0A6YYG2 114 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 SOCS1O15524 211 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 SPDEFO95238 335 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 CDK1P06493 297 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 RPS16P62249 146 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 QRFPP83859 136 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 RCN1Q15293 331 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 STPG3Q8N7X2 389 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 DRAXINQ8NBI3 349 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 FBLIM1Q8WUP2 373 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 AGMATQ9BSE5 352 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 LPAR5Q9H1C0 372 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 FKBP14Q9NWM8 211 aa9.77□□□□□ -0.85
CDK5RAP3-213ENST00000579605 UBE2CO00762 179 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 HLA-AP01891 365 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 APOA2P02652 100 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 SCTP09683 121 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 RPL35AP18077 110 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 TCTAP57738 103 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 PJVKQ0ZLH3 352 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 P2RY14Q15391 338 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 ZNF57Q68EA5 555 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 PDPNQ86YL7 162 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 PTX4Q96A99 478 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 MFFQ9GZY8 342 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 PLGRKTQ9HBL7 147 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 Q9N2K0 584 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 UBQLN2Q9UHD9 624 aa9.76□□□□□ -0.85
CDK5RAP3-213ENST00000579605 PPP5D1E7EU14 171 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 PTGES3LE9PB15 166 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 OR2C1O95371 312 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 IGKV1-16P04430 117 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 UCHL1P09936 223 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 CD37P11049 281 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 CBLN1P23435 193 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 LINC00205P59089 165 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 EXOSC2Q13868 293 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 SPHARQ15513 63 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 MED22Q15528 200 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 ANKRD55Q3KP44 614 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 FAM89BQ8N5H3 189 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 ZNF645Q8N7E2 425 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 ZNF383Q8NA42 475 aa9.75□□□□□ -0.85
CDK5RAP3-213ENST00000579605 UFD1Q92890 307 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms