RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 FAM24BQ8N5W8 94 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 LINC00301Q8NCQ3 95 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF439Q8NDP4 499 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 DUSP18Q8NEJ0 188 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 OR8G5Q8NG78 346 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 OR5A2Q8NGI9 324 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 OR1L8Q8NGR8 309 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 CT45A3Q8NHU0 189 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 MCFD2Q8NI22 146 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 TSLPQ969D9 159 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 DDIT4LQ96D03 193 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 SEC22AQ96IW7 307 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 ERMAPQ96PL5 475 aaPredicted RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST1H2BLQ99880 126 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 RASL11BQ9BPW5 248 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 THTPAQ9BU02 230 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 OR8D2Q9GZM6 311 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 SLC25A31Q9H0C2 315 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 TMEM133Q9H2Q1 129 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 RBKSQ9H477 322 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 FGF20Q9NP95 211 aaPredicted RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 GPR84Q9NQS5 396 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 SPANXB1Q9NS25 103 aaPredicted RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 UQCC1Q9NVA1 299 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 C1orf123Q9NWV4 160 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 FAM206AQ9NX38 181 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF629Q9UEG4 869 aaPredicted RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 LSM7Q9UK45 103 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 PRNDQ9UKY0 176 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 TBX21Q9UL17 535 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 PCYT1BQ9Y5K3 369 aaPredicted RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 ROBO3Q96MS0 1386 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 SSH2Q76I76 1423 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 PLEKHH2Q8IVE3 1493 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 ZMYM4Q5VZL5 1548 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 KIF1AQ12756 1690 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 NALCNQ8IZF0 1738 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 PTPRFP10586 1907 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 BORCS7-ASMTA0A0B4J1R7 106 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 A0A1W2PRS3 328 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 CEACAM18A8MTB9 384 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF705GA8MUZ8 300 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 BTNL10A8MVZ5 291 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 C9JAW5 83 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 CCDC179H3BU77 68 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 SULT2B1O00204 365 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 TNFRSF11BO00300 401 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 TRAPPC6AO75865 159 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 SIX6O95475 246 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF728P0DKX0 622 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 SULT1A3P0DMM9 295 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 SULT1A4P0DMN0 295 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 FABP4P15090 132 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 IGFBP3P17936 291 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 USF1P22415 310 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 EVI2AP22794 236 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 TNFSF9P41273 254 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 OR1E2P47887 323 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 HSPE1P61604 102 aaKnown RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 GNG5P63218 68 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 EIF5AP63241 154 aaKnown RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 TNFAIP6P98066 277 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 FABP5Q01469 135 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 MEF2BQ02080 365 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 CD164Q04900 197 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 DHRS2Q13268 280 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 GGTLC2Q14390 218 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 GINS1Q14691 196 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 ACOT6Q3I5F7 207 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 TP53I3Q53FA7 332 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 TEX36Q5VZQ5 186 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 UNQ5815/PRO19632Q6UWF5 114 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 SLC25A48Q6ZT89 311 aaKnown RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 KRTAP13-1Q8IUC0 172 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 SLC35G3Q8N808 338 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 ZFP41Q8N8Y5 198 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 OR11G2Q8NGC1 345 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 OR52E2Q8NGJ4 325 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 OR2K2Q8NGT1 345 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 FRZBQ92765 325 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 PPCDCQ96CD2 204 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 DIRAS2Q96HU8 199 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 TSPAN32Q96QS1 320 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 ATP5SQ99766 215 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 GABRG3Q99928 467 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 SEC11CQ9BY50 192 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 VSIRQ9H7M9 311 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 CA10Q9NS85 328 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 LYRM2Q9NU23 88 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 ASF1BQ9NVP2 202 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF226Q9NYT6 803 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 CES1P1Q9UKY3 287 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 HIGD1AQ9Y241 93 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 PKIGQ9Y2B9 76 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 CASKIN1Q8WXD9 1431 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 MYOM2P54296 1465 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 ERVK-7P63135 1459 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 CDK12Q9NYV4 1490 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 BIVM-ERCC5R4GMW8 1640 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms