RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 V9GYH0 126 aa7.59□□□□□ -1.19
CCDC40-214ENST00000575431 ANKRD20A5PA0PJZ0 165 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 LINC00473A8K010 186 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 DISC1C4P0D8 188 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 GPR31O00270 319 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 SHOXO15266 292 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 CREBL2O60519 120 aaPredicted RBP7.58□□□□□ -1.2
CCDC40-214ENST00000575431 IGKV1-16P04430 117 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 GNRHRP30968 328 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 FAUP35544 74 aaKnown RBP7.58□□□□□ -1.2
CCDC40-214ENST00000575431 SLC35B1P78383 322 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 EIF4EBP1Q13541 118 aaPredicted RBP7.58□□□□□ -1.2
CCDC40-214ENST00000575431 PLGLAQ15195 96 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 PSG5Q15238 335 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 VMA21Q3ZAQ7 101 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 FBLN7Q53RD9 439 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 PYDC2Q56P42 97 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 Q6ZS46 218 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 CENPVQ7Z7K6 275 aaPredicted RBP7.58□□□□□ -1.2
CCDC40-214ENST00000575431 LHFPL1Q86WI0 220 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 SLC38A6Q8IZM9 456 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 COMMD1Q8N668 190 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 KLHDC1Q8N7A1 406 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 GDPD1Q8N9F7 314 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 OR4S2Q8NH73 311 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 TERB2Q8NHR7 220 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 TCTEX1D2Q8WW35 142 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 C5orf30Q96GV9 206 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 HARBI1Q96MB7 349 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 PRRT1Q99946 306 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 CITED1Q99966 193 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 SIGLEC9Q9Y336 463 aa7.58□□□□□ -1.2
CCDC40-214ENST00000575431 M0QYG6 137 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 FCGR3BO75015 233 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 CRYZL1O95825 349 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 HRASP01112 189 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 IGF1P05019 195 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 VSIG10L2P0DP72 767 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 LINC00205P59089 165 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 UBE2KP61086 200 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 SURF2Q15527 256 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-214ENST00000575431 ZNF79Q15937 498 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 AADACL3Q5VUY0 350 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 ZNF562Q6V9R5 426 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 ZNF818PQ6ZRF7 136 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 PPP1R27Q86WC6 154 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 SPAG16Q8N0X2 631 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 Q8N402 240 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 TEX45Q8NA69 505 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 VSTM2AQ8TAG5 236 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 ZFAND1Q8TCF1 268 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 RITA1Q96K30 269 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 SCGB3A2Q96PL1 93 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 RSRP1Q9BUV0 290 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 TINAGL1Q9GZM7 467 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-214ENST00000575431 FBXL15Q9H469 300 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 FAM212BQ9NTI7 297 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-214ENST00000575431 METTL1Q9UBP6 276 aaKnown RBP7.57□□□□□ -1.2
CCDC40-214ENST00000575431 SCP2D1Q9UJQ7 156 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 ATRQ13535 2644 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 CUBNO60494 3623 aa7.57□□□□□ -1.2
CCDC40-214ENST00000575431 PSMB11A5LHX3 300 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 SH2D7A6NKC9 451 aaPredicted RBP7.56□□□□□ -1.2
CCDC40-214ENST00000575431 FBXO24O75426 580 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 PGLYRP1O75594 196 aaPredicted RBP7.56□□□□□ -1.2
CCDC40-214ENST00000575431 HPRT1P00492 218 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 F2RP25116 425 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 CNTFRP26992 372 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 RPL30P62888 115 aaKnown RBP7.56□□□□□ -1.2
CCDC40-214ENST00000575431 TMEM267Q0VDI3 215 aaPredicted RBP7.56□□□□□ -1.2
CCDC40-214ENST00000575431 SCGB2B2Q4G0G5 96 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 STPG2Q8N412 459 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 TOMM5Q8N4H5 51 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 OR5AU1Q8NGC0 362 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 OR4X2Q8NGF9 303 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 SGMS2Q8NHU3 365 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 FXYD6Q9H0Q3 95 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 OR51J1Q9H342 316 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 PLEKHA2Q9HB19 425 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 SLC2A8Q9NY64 477 aa7.56□□□□□ -1.2
CCDC40-214ENST00000575431 IGHV7-81A0A0B4J1V7 117 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 TNFSF12O43508 249 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 SLC25A17O43808 307 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 B3GALNT1O75752 331 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 IGLV2-23P01705 113 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 OPN1MWP04001 364 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 CRYGBP07316 175 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 ZNF735P0CB33 412 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 OPN1MW2P0DN77 364 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 OPN1MW3P0DN78 364 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 PGAM2P15259 253 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 VDAC1P21796 283 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 INPP1P49441 399 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 TAS2R31P59538 309 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 RND3P61587 244 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 CX3CL1P78423 397 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 CNPY1Q3B7I2 92 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 MMD2Q8IY49 270 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 CCDC71LQ8N9Z2 235 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 OR4D10Q8NGI6 311 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms