RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 C4orf46Q504U0 113 aa10.85□□□□□ -0.67
LINC01996-201ENST00000573270 ZNF66Q6ZN08 573 aa10.85□□□□□ -0.67
LINC01996-201ENST00000573270 CCDC71LQ8N9Z2 235 aa10.85□□□□□ -0.67
LINC01996-201ENST00000573270 CAPSLQ8WWF8 208 aa10.85□□□□□ -0.67
LINC01996-201ENST00000573270 ADTRPQ96IZ2 230 aa10.85□□□□□ -0.67
LINC01996-201ENST00000573270 SSX3Q99909 188 aa10.85□□□□□ -0.67
LINC01996-201ENST00000573270 MEGF9Q9H1U4 602 aa10.85□□□□□ -0.67
LINC01996-201ENST00000573270 TNFRSF19Q9NS68 423 aa10.85□□□□□ -0.67
LINC01996-201ENST00000573270 LIN7CQ9NUP9 197 aaKnown RBP10.85□□□□□ -0.67
LINC01996-201ENST00000573270 KCNIP3Q9Y2W7 256 aa10.85□□□□□ -0.67
LINC01996-201ENST00000573270 NIPBLQ6KC79 2804 aaeCLIP10.85□□□□□ -0.67
LINC01996-201ENST00000573270 DNAJC9-AS1A6NH13 148 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 CRYM-AS1A6NIL9 109 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 RNF212BA8MTL3 300 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 H7C2Y5 167 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 HOXA3O43365 443 aaPredicted RBP10.84□□□□□ -0.67
LINC01996-201ENST00000573270 FAM157CP0CG43 387 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 AKR1C4P17516 323 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 ANXA7P20073 488 aaKnown RBP10.84□□□□□ -0.67
LINC01996-201ENST00000573270 EIF2B2P49770 351 aaKnown RBP10.84□□□□□ -0.67
LINC01996-201ENST00000573270 CBX3Q13185 183 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 HES1Q14469 280 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 HABP2Q14520 560 aaPredicted RBP10.84□□□□□ -0.67
LINC01996-201ENST00000573270 LY6EQ16553 131 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 ZFP69Q49AA0 526 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 Q6YL49 198 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 TCTE3Q8IZS6 198 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 OR5AN1Q8NGI8 311 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 NAA60Q9H7X0 242 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 BEX1Q9HBH7 125 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 WASHC3Q9Y3C0 194 aa10.84□□□□□ -0.67
LINC01996-201ENST00000573270 TEX13DA0A0J9YY54 714 aaPredicted RBP10.83□□□□□ -0.68
LINC01996-201ENST00000573270 H0Y980 276 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 RAMP3O60896 148 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 FCGR3BO75015 233 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 IGKV1-16P04430 117 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 ANXA3P12429 323 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 F2RP25116 425 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 BRS3P32247 399 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 DYNLT3P51808 116 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 RTL8BQ17RB0 113 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 TMEM219Q86XT9 240 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 PDPNQ86YL7 162 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 SPAG16Q8N0X2 631 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 PIFOQ8TCI5 191 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 HYLS1Q96M11 299 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 DUX5Q96PT3 197 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 TP53RKQ96S44 253 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 PHB2Q99623 299 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 PRDM13Q9H4Q3 707 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 ESM1Q9NQ30 184 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 PRR13Q9NZ81 148 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 TCF19Q9Y242 345 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 PRELID3BQ9Y3B1 194 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 CUBNO60494 3623 aa10.83□□□□□ -0.68
LINC01996-201ENST00000573270 BTBD17A6NE02 478 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 MPPED1O15442 326 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 S1PR2O95136 353 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 CRYZL1O95825 349 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 OR5AC1P0C628 307 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 VSIG10L2P0DP72 767 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 TMEM11P17152 192 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 VAMP1P23763 118 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 CNTFRP26992 372 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 CD1BP29016 333 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 KIR2DS2P43631 304 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 IER3P46695 156 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 BRWD1-AS2P59051 145 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 SUPT4H1P63272 117 aaKnown RBP10.82□□□□□ -0.68
LINC01996-201ENST00000573270 CYCSP99999 105 aaKnown RBP10.82□□□□□ -0.68
LINC01996-201ENST00000573270 FGL1Q08830 312 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 PPP1R1AQ13522 171 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 SLC9A3R2Q15599 337 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 AANATQ16613 207 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 TMEM128Q5BJH2 165 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 SLC25A42Q86VD7 318 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 OR4S2Q8NH73 311 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 ZNF431Q8TF32 576 aaPredicted RBP10.82□□□□□ -0.68
LINC01996-201ENST00000573270 SSMEM1Q8WWF3 244 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 HARBI1Q96MB7 349 aa10.82□□□□□ -0.68
LINC01996-201ENST00000573270 NF1P21359 2839 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 C3orf85A0A1B0GTC6 90 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 FAM90A9PA6NNJ1 464 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 CHST1O43916 411 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 B3GALNT1O75752 331 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 MOSP00540 346 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 OR4E1P0C645 316 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 HNF4GQ14541 408 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 SP6Q3SY56 376 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 RBMS3Q6XE24 437 aaKnown RBP10.81□□□□□ -0.68
LINC01996-201ENST00000573270 Q8N6K4 173 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 OR2T10Q8NGZ9 312 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 COQ8AQ8NI60 647 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 EAF1Q96JC9 268 aaPredicted RBP10.81□□□□□ -0.68
LINC01996-201ENST00000573270 VPREB3Q9UKI3 123 aa10.81□□□□□ -0.68
LINC01996-201ENST00000573270 A0A0B4J2A0 478 aa10.8□□□□□ -0.68
LINC01996-201ENST00000573270 A6NDX4 124 aa10.8□□□□□ -0.68
LINC01996-201ENST00000573270 HLA-AP01891 365 aaKnown RBP10.8□□□□□ -0.68
LINC01996-201ENST00000573270 FAM106CPP0CH98 169 aa10.8□□□□□ -0.68
LINC01996-201ENST00000573270 RRASP10301 218 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms