RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 KRTAP1-1Q07627 177 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 DHRS2Q13268 280 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 PLGLAQ15195 96 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 LRRC75BQ2VPJ9 315 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 VMA21Q3ZAQ7 101 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 KLF17Q5JT82 389 aaPredicted RBP5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 THOC7Q6I9Y2 204 aaKnown RBP5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 LDLRAD3Q86YD5 345 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 ZNF695Q8IW36 515 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 LGI3Q8N145 548 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 ZNF383Q8NA42 475 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 UXS1Q8NBZ7 420 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 DMBX1Q8NFW5 382 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 ZNF431Q8TF32 576 aaPredicted RBP5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 C22orf15Q8WYQ4 148 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMEM230Q96A57 120 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 FLYWCH2Q96CP2 140 aaKnown RBP5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 ANAPC16Q96DE5 110 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 RRNAD1Q96FB5 475 aaKnown RBP5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 GALNT14Q96FL9 552 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 C5orf30Q96GV9 206 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 GPHA2Q96T91 129 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 NABP2Q9BQ15 211 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 ZNF251Q9BRH9 671 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 SEC22CQ9BRL7 303 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 AIFM2Q9BRQ8 373 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 RTBDNQ9BSG5 229 aaPredicted RBP5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMEM222Q9H0R3 208 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 ALX4Q9H161 411 aaPredicted RBP5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 COMMD9Q9P000 198 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 KIAA1456Q9P272 454 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 C9orf170A2RU37 121 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 LINC00473A8K010 186 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 SNRPGP15A8MWD9 76 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 LY6LH3BQJ8 138 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 RBMXL2O75526 392 aaKnown RBP5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 S1PR2O95136 353 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 DUS4LO95620 317 aaKnown RBP5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 HPRT1P00492 218 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 MOSP00540 346 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 HRASP01112 189 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 FSHBP01225 129 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 IFNA21P01568 189 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 IL5P05113 134 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 SNRNP70P08621 437 aaKnown RBP5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 CT45A6P0DMU7 189 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 CT45A5P0DMU8 189 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 CT45A7P0DMV0 189 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMEM11P17152 192 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 CD1BP29016 333 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 MECP2P51608 486 aaKnown RBP5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 RPS16P62249 146 aaKnown RBP5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 DIAPH2-AS1Q14236 149 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 MMDQ15546 238 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 SP6Q3SY56 376 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMEM268Q5VZI3 342 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 LIN54Q6MZP7 749 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 C9orf139Q6ZV77 190 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR52B4Q8NGK2 314 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR4C13Q8NGP0 309 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR2T10Q8NGZ9 312 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 VSTM2AQ8TAG5 236 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 OSR1Q8TAX0 266 aaPredicted RBP5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 RBPMSQ93062 196 aaKnown RBP5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 IL22RA2Q969J5 263 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 ST6GALNAC6Q969X2 333 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 TP53RKQ96S44 253 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 TSNAXQ99598 290 aaKnown RBP5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 SPIN2AQ99865 258 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 SMR3AQ99954 134 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 SPIN2BQ9BPZ2 258 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 FAM212BQ9NTI7 297 aaPredicted RBP5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 PRR13Q9NZ81 148 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 PITPNC1Q9UKF7 332 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 ALG5Q9Y673 324 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 AKAP6Q13023 2319 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 SPG11Q96JI7 2443 aa5.31□□□□□ -1.56
CTDNEP1-204ENST00000570484 BAHCC1Q9P281 2608 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 TACC2O95359 2948 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 hCG_2014768A0A024R1R8 64 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 MDFIC2A0A1B0GVS7 189 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 DUXBA0A1W2PPF3 345 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 MARCH11A6NNE9 402 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 FAM25EA8MYX2 175 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 H3BUX3 64 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 GOSR2O14653 212 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 RAMP3O60896 148 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 VENTXO95231 258 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 SPDEFO95238 335 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 VSIG10L2P0DP72 767 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 NQO2P16083 231 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 UCP1P25874 307 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 LPAR6P43657 344 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 RPL30P62888 115 aaKnown RBP5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 EIF4EBP1Q13541 118 aaPredicted RBP5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMEM187Q14656 261 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 AANATQ16613 207 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 DEFB112Q30KQ8 113 aa5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 Q71RC1 249 aaPredicted RBP5.3□□□□□ -1.56
CTDNEP1-204ENST00000570484 SSX9Q7RTT3 188 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms