RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 OR5B3Q8NH48 314 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 EDARADDQ8WWZ3 215 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 HARBI1Q96MB7 349 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 CCDC140Q96MF4 163 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 SPAG8Q99932 426 aaPredicted RBP7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 FAAP24Q9BTP7 215 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 THTPAQ9BU02 230 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 GABARAPL3Q9BY60 117 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 ERVK13-1Q9NX77 482 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 S4R3C0 116 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 TRAV8-7A0A075B6U6 113 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 M0R1X1 148 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 SHOXO15266 292 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 CRTAPO75718 401 aaPredicted RBP7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 NAPSAO96009 420 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 PRSS8Q16651 343 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 LGALS9BQ3B8N2 356 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 UNQ9165/PRO28630Q6UXU0 137 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 ZDHHC13Q8IUH4 622 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 Q8N1X5 172 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 JAGN1Q8N5M9 183 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 TRUB1Q8WWH5 349 aaKnown RBP7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 PTX4Q96A99 478 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 CSTL1Q9H114 145 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 C5orf66Q9H5L9 145 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 AASSQ9UDR5 926 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 ZNF221Q9UK13 617 aa7.62□□□□□ -1.19
CTDNEP1-202ENST00000570380 DMBT1Q9UGM3 2413 aaPredicted RBP7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 MPTX1A8MV57 137 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 TSPAN4O14817 238 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 SCTP09683 121 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 ZBTB25P24278 435 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 SNRPGP62308 76 aaKnown RBP7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 FLOT2Q14254 428 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 MED22Q15528 200 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 MEDAGQ5VYS4 303 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 PVRIGQ6DKI7 326 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 IDO2Q6ZQW0 420 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 C19orf35Q6ZS72 473 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 C6orf201Q7Z4U5 140 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 TEX45Q8NA69 505 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 OR13C5Q8NGS8 318 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 SETD6Q8TBK2 473 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 CD300LFQ8TDQ1 290 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 ACOT12Q8WYK0 555 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 MARC2Q969Z3 335 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 MYCBPQ99417 103 aaPredicted RBP7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 IMPAD1Q9NX62 359 aa7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 MRPL27Q9P0M9 148 aaKnown RBP7.61□□□□□ -1.19
CTDNEP1-202ENST00000570380 GYG2O15488 501 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 UBE2KP61086 200 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 MED21Q13503 144 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 ATP6AP1Q15904 470 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 ZNF124Q15973 351 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 C10orf55Q5SWW7 151 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 GLT8D1Q68CQ7 371 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 RPL22L1Q6P5R6 122 aaKnown RBP7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 APRG1Q8IVJ8 170 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 SETD9Q8NE22 299 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 OR4A5Q8NH83 315 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 NEDD4LQ96PU5 975 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 SPIN2AQ99865 258 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 SPIN2BQ9BPZ2 258 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 HRH4Q9H3N8 390 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 CHMP1AQ9HD42 196 aaPredicted RBP7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 SCRT2Q9NQ03 307 aa7.6□□□□□ -1.19
CTDNEP1-202ENST00000570380 TRBV5-5A0A0J9YX44 114 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 HMX3A6NHT5 357 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 C16orf90A8MZG2 172 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 P0DMU3 169 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 FAM231AP0DMU4 169 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 FAM231CP0DMU5 169 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 HLA-DMBP28068 263 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 ADMP35318 185 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 VMA21Q3ZAQ7 101 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 DNAL1Q4LDG9 190 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 Q6ZR54 194 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 Q6ZTC4 211 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 CEACAM19Q7Z692 300 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 NR2C2APQ86WQ0 139 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 FANCD2OSQ96PS1 177 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 RNF126Q9BV68 326 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 ZNF430Q9H8G1 570 aaPredicted RBP7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 SDHAF2Q9NX18 166 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 ZNF257Q9Y2Q1 563 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 DNAH5Q8TE73 4624 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 NACAE9PAV3 2078 aa7.59□□□□□ -1.19
CTDNEP1-202ENST00000570380 TRBV6-6A0A0A6YYG2 114 aa7.58□□□□□ -1.2
CTDNEP1-202ENST00000570380 TRAV10A0A0B4J240 114 aa7.58□□□□□ -1.2
CTDNEP1-202ENST00000570380 IGHV3-35A0A0C4DH35 117 aa7.58□□□□□ -1.2
CTDNEP1-202ENST00000570380 IGKV1-6A0A0C4DH72 117 aa7.58□□□□□ -1.2
CTDNEP1-202ENST00000570380 A0A1W2PPK0 400 aa7.58□□□□□ -1.2
CTDNEP1-202ENST00000570380 SNTNA6NMZ2 147 aa7.58□□□□□ -1.2
CTDNEP1-202ENST00000570380 LIMS3P0CW19 117 aa7.58□□□□□ -1.2
CTDNEP1-202ENST00000570380 LIMS4P0CW20 117 aa7.58□□□□□ -1.2
CTDNEP1-202ENST00000570380 GALP22466 123 aa7.58□□□□□ -1.2
CTDNEP1-202ENST00000570380 ELLP55199 621 aaPredicted RBP7.58□□□□□ -1.2
CTDNEP1-202ENST00000570380 HLA-DRB3P79483 266 aa7.58□□□□□ -1.2
CTDNEP1-202ENST00000570380 TAGLNQ01995 201 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms