RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 SMDT1Q9H4I9 107 aa9.74□□□□□ -0.85
PDXDC1-217ENST00000570001 CARHSP1Q9Y2V2 147 aaKnown RBP9.74□□□□□ -0.85
PDXDC1-217ENST00000570001 IGKV1-5P01602 117 aa9.74□□□□□ -0.85
PDXDC1-217ENST00000570001 DAOP14920 347 aa9.74□□□□□ -0.85
PDXDC1-217ENST00000570001 SPCS3P61009 180 aa9.74□□□□□ -0.85
PDXDC1-217ENST00000570001 GCM1Q9NP62 436 aa9.74□□□□□ -0.85
PDXDC1-217ENST00000570001 ZNF729A6NN14 1252 aaPredicted RBP9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 MORN2Q502X0 79 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 BARX1Q9HBU1 254 aaPredicted RBP9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 C17orf100A8MU93 164 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 ZCCHC24Q8N2G6 241 aaKnown RBP9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 ZDHHC16Q969W1 377 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 RARRES2Q99969 163 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 TMEM140Q9NV12 185 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 IGKV1D-17A0A075B6S4 117 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 KBTBD11-OT1A0A1B0GTJ5 212 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 SELLP14151 372 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 S100A2P29034 98 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 CDC34P49427 236 aaPredicted RBP9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 KIAA1549Q9HCM3 1950 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 COL6A6A6NMZ7 2263 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 YPEL1O60688 119 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 CGAP01215 116 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 RPL30P62888 115 aaKnown RBP9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 ISOC2Q96AB3 205 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 SLC35E1Q96K37 410 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 YPEL2Q96QA6 119 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 FKBP11Q9NYL4 201 aa9.73□□□□□ -0.85
PDXDC1-217ENST00000570001 PLCE1Q9P212 2302 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 MT-ND4LP03901 98 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 SUB1P53999 127 aaKnown RBP eCLIP9.72□□□□□ -0.859e-9■■■■■ 41.4
PDXDC1-217ENST00000570001 STUMQ69YW2 141 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 QTRT1Q9BXR0 403 aaKnown RBP9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 CISD1Q9NZ45 108 aaKnown RBP9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 CUL9Q8IWT3 2517 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 KHDC3LQ587J8 217 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 PRNDQ9UKY0 176 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 CD1BP29016 333 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 CEACAM8P31997 349 aaPredicted RBP9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 REG1BP48304 166 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 UBE2G2P60604 165 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 Q6ZRM9 215 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 FAM24BQ8N5W8 94 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 HARBI1Q96MB7 349 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 WDR61Q9GZS3 305 aaKnown RBP9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 HES4Q9HCC6 221 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 ARG1P05089 322 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 Q6ZPA2 131 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 CYB561D1Q8N8Q1 229 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 RPRMQ9NS64 109 aa9.72□□□□□ -0.85
PDXDC1-217ENST00000570001 NPY1RP25929 384 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 RPL19P84098 196 aaKnown RBP9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 VMA21Q3ZAQ7 101 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 ZNF525Q8N782 197 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 C15orf54Q8N8G6 183 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 PSMG3Q9BT73 122 aaPredicted RBP9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 COA4Q9NYJ1 87 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 ZNF318Q5VUA4 2279 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 H3BQ15 152 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 ZNF585BQ52M93 769 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 UHRF2Q96PU4 802 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 VAX2Q9UIW0 290 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 SSUH2Q9Y2M2 353 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 RAXQ9Y2V3 346 aa9.71□□□□□ -0.85
PDXDC1-217ENST00000570001 CTXND1A0A1B0GTU2 59 aa9.71□□□□□ -0.86
PDXDC1-217ENST00000570001 SEM1Q6ZVN7 128 aa9.71□□□□□ -0.86
PDXDC1-217ENST00000570001 C11orf53Q8IXP5 236 aa9.71□□□□□ -0.86
PDXDC1-217ENST00000570001 LINC01560Q8TB33 94 aa9.71□□□□□ -0.86
PDXDC1-217ENST00000570001 NEIL1Q96FI4 390 aaPredicted RBP9.71□□□□□ -0.86
PDXDC1-217ENST00000570001 J3QR06 171 aa9.71□□□□□ -0.86
PDXDC1-217ENST00000570001 BCL2P10415 239 aa9.71□□□□□ -0.86
PDXDC1-217ENST00000570001 DUTP33316 252 aaKnown RBP9.71□□□□□ -0.86
PDXDC1-217ENST00000570001 GUSBP1Q15486 140 aa9.71□□□□□ -0.86
PDXDC1-217ENST00000570001 LRRC75BQ2VPJ9 315 aa9.71□□□□□ -0.86
PDXDC1-217ENST00000570001 TMEM106BQ9NUM4 274 aa9.71□□□□□ -0.86
PDXDC1-217ENST00000570001 CHRNB4P30926 498 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 KLRB1Q12918 225 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 TMEM30BQ3MIR4 351 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 MOB3BQ86TA1 216 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 FLYWCH2Q96CP2 140 aaKnown RBP9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 RAB1BQ9H0U4 201 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 RNF115Q9Y4L5 304 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 OR51B2Q9Y5P1 312 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 A0A0U1RQK1 487 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 TM4SF5O14894 197 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 PPIHO43447 177 aaKnown RBP9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 GNB1P62873 340 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 MST1LQ2TV78 715 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 TGIF2LYQ8IUE0 185 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 TGIF2LXQ8IUE1 241 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 OR13D1Q8NGV5 346 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 RFNGQ9Y644 331 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 DNASE2O00115 360 aaPredicted RBP9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 EIF3GO75821 320 aaKnown RBP eCLIP9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 HSPB1P04792 205 aaKnown RBP9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 FAM53AQ6NSI3 398 aaPredicted RBP9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 SLC24A4Q8NFF2 622 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 VSTM2AQ8TAG5 236 aa9.7□□□□□ -0.86
PDXDC1-217ENST00000570001 SSMEM1Q8WWF3 244 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms