RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 LINC00336Q6ZUF6 198 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 EEF1AKMT3Q96AZ1 226 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 SDF2Q99470 211 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 CABLES2Q9BTV7 478 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 LINC00470Q9BZP3 86 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 TMEM100Q9NV29 134 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 FLRT3Q9NZU0 649 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 Q9UFV3 132 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 POLEQ07864 2286 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 EML6Q6ZMW3 1958 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 A0A0A0MQY5 61 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 ZAR1LA6NP61 321 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 F8VVB4 439 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 F8VWA3 439 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 CDC42EP2O14613 210 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 MPC2O95563 127 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 FABP4P15090 132 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 WT1P19544 449 aaPredicted RBP5.59□□□□□ -1.51
SMG1-217ENST00000569764 PRTN3P24158 256 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 ALKAL2Q6UX46 152 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 MBOAT2Q6ZWT7 520 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 C9orf40Q8IXQ3 194 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 APCDD1LQ8NCL9 501 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 DERL1Q9BUN8 251 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 KCNIP1Q9NZI2 227 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 WDR83OSQ9Y284 106 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 RNF114Q9Y508 228 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 PIGBOS1A0A0B4J2F0 54 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 CPSF4LA6NMK7 179 aaKnown RBP5.59□□□□□ -1.51
SMG1-217ENST00000569764 LYPD3O95274 346 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 FAM157CP0CG43 387 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 IGFBP2P18065 325 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 NPY1RP25929 384 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 GUSBP1Q15486 140 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 ZNF141Q15928 474 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 CEACAM16Q2WEN9 425 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 MKXQ8IYA7 352 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 DUSP18Q8NEJ0 188 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 ASB13Q8WXK3 278 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 UPRTQ96BW1 309 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 SLC25A39Q9BZJ4 359 aaPredicted RBP5.59□□□□□ -1.51
SMG1-217ENST00000569764 BCL2L10Q9HD36 194 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 SH2D2AQ9NP31 389 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 ACOT13Q9NPJ3 140 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 AMMECR1Q9Y4X0 333 aaPredicted RBP5.59□□□□□ -1.51
SMG1-217ENST00000569764 MED12Q93074 2177 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 TMEM189A5PLL7 270 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 RHODO00212 210 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 OR7C1O76099 320 aaPredicted RBP5.59□□□□□ -1.51
SMG1-217ENST00000569764 NGFP01138 241 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 IL6RP08887 468 aaPredicted RBP5.59□□□□□ -1.51
SMG1-217ENST00000569764 ERVFC1-1P60608 527 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 GRB2P62993 217 aaKnown RBP5.59□□□□□ -1.51
SMG1-217ENST00000569764 PSG6Q00889 435 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 MS4A18Q3C1V0 323 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 STUMQ69YW2 141 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 TCTEX1D1Q8N7M0 179 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 THAP8Q8NA92 274 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 DMBX1Q8NFW5 382 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 OR5R1Q8NH85 324 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 TMEM255BQ8WV15 326 aa5.59□□□□□ -1.51
SMG1-217ENST00000569764 BBC3Q96PG8 261 aaPredicted RBP5.59□□□□□ -1.51
SMG1-217ENST00000569764 A0A1W2PPI3 338 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 TOXO94900 526 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 CELA2AP08217 269 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 MAP2K3P46734 347 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 EMDP50402 254 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 GAS1P54826 345 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 EIF2B1Q14232 305 aaKnown RBP5.59□□□□□ -1.52
SMG1-217ENST00000569764 MRPL2Q5T653 305 aaKnown RBP5.59□□□□□ -1.52
SMG1-217ENST00000569764 LYRM7Q5U5X0 104 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 MOB1BQ7L9L4 216 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 PSMF1Q92530 271 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 SLC25A44Q96H78 314 aaPredicted RBP5.59□□□□□ -1.52
SMG1-217ENST00000569764 SLC35E1Q96K37 410 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 PRSS27Q9BQR3 290 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 RNASE7Q9H1E1 156 aaKnown RBP5.59□□□□□ -1.52
SMG1-217ENST00000569764 CXXC4Q9H2H0 198 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 ZNF442Q9H7R0 627 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 C1RLQ9NZP8 487 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 FZR1Q9UM11 496 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 DMXL2Q8TDJ6 3036 aa5.59□□□□□ -1.52
SMG1-217ENST00000569764 INMT-MINDY4F8WBC2 141 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 SLC2A10O95528 541 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 AMBPP02760 352 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 IGKV3-11P04433 115 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 FOLR2P14207 255 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 DUTP33316 252 aaKnown RBP5.58□□□□□ -1.52
SMG1-217ENST00000569764 P2RY1P47900 373 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 RPL8P62917 257 aaKnown RBP5.58□□□□□ -1.52
SMG1-217ENST00000569764 SLC18B1Q6NT16 456 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 TRAPPC6BQ86SZ2 158 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 OSR2Q8N2R0 312 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 NUP210LQ5VU65 1888 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 ANKRD20A5PA0PJZ0 165 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 KNG1P01042 644 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 GCGP01275 180 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 HOXA5P20719 270 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 AADACP22760 399 aa5.58□□□□□ -1.52
SMG1-217ENST00000569764 RPS10P46783 165 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms