RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 HEATR1Q9H583 2144 aaKnown RBP7.34□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF665Q9H7R5 613 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 GOLT1BQ9Y3E0 138 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 ARHGAP21Q5T5U3 1957 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 INTS1Q8N201 2190 aaKnown RBP7.34□□□□□ -1.24
LINC00558-201ENST00000569422 KMT2EQ8IZD2 1858 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 H3BQ15 152 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.33□□□□□ -1.24
LINC00558-201ENST00000569422 DEFA4P12838 97 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 UBE2KP61086 200 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 TLE4Q04727 773 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 GAGE1Q13065 139 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 HMGN3Q15651 99 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 PRAMEF5Q5TYX0 476 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 ZNF343Q6P1L6 599 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 ACP7Q6ZNF0 438 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 MOB1BQ7L9L4 216 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 ZNRF1Q8ND25 227 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 DEFB108BQ8NET1 73 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 LEAP2Q969E1 77 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 IL22RA2Q969J5 263 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 R3HDM4Q96D70 268 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 NUDT11Q96G61 164 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 FAM210BQ96KR6 192 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 OR4C12Q96R67 309 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 CXXC4Q9H2H0 198 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 WSB1Q9Y6I7 421 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 USF3Q68DE3 2245 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 IGHV1-18A0A0C4DH31 117 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 DFFBO76075 338 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 OR2C1O95371 312 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 IGKV3-15P01624 115 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 IGHG3P01860 377 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 ACSF3Q4G176 576 aaPredicted RBP7.33□□□□□ -1.24
LINC00558-201ENST00000569422 HAPLN4Q86UW8 402 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 ZNF429Q86V71 674 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 LFNGQ8NES3 379 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 C5orf30Q96GV9 206 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 TPPP3Q9BW30 176 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 RBKSQ9H477 322 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 MBNL3Q9NUK0 354 aaKnown RBP7.33□□□□□ -1.24
LINC00558-201ENST00000569422 GNG12Q9UBI6 72 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 DOCK11Q5JSL3 2073 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 ATMQ13315 3056 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 AKAP13Q12802 2813 aa7.33□□□□□ -1.24
LINC00558-201ENST00000569422 IGHV2OR16-5A0A0B4J2B6 119 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 ZG16O60844 167 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 LY86O95711 162 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 RPS10P46783 165 aaKnown RBP7.32□□□□□ -1.24
LINC00558-201ENST00000569422 SSX7Q7RTT5 188 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 REC114Q7Z4M0 266 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 VKORC1L1Q8N0U8 176 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 STXBP6Q8NFX7 210 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 RAB39BQ96DA2 213 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 STARD4Q96DR4 205 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 PIMREGQ9BSJ6 248 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 PEF1Q9UBV8 284 aaKnown RBP7.32□□□□□ -1.24
LINC00558-201ENST00000569422 WIPI2Q9Y4P8 454 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 OOEPA6NGQ2 149 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 PRR33A8MZF0 331 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 EGR1P18146 543 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 BMP5P22003 454 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 RAB2AP61019 212 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 SLC38A11Q08AI6 406 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 ICAM4Q14773 271 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 MSMPQ1L6U9 139 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 C9orf152Q5JTZ5 239 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 ZNF787Q6DD87 383 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 SLC16A13Q7RTY0 426 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 ZNF645Q8N7E2 425 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 C15orf54Q8N8G6 183 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 RNF125Q96EQ8 232 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 DKK4Q9UBT3 224 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 ADGRG4Q8IZF6 3080 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 ODAMA1E959 279 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 LINC00473A8K010 186 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 CEBPZOSA8MTT3 80 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 K7EM74 188 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 TNFSF13O75888 250 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 SRP19P09132 144 aaKnown RBP7.32□□□□□ -1.24
LINC00558-201ENST00000569422 GATA4P43694 442 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 HBG1P69891 147 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 HBG2P69892 147 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 DLK1P80370 383 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 PIP4P1Q86T03 277 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 ZADH2Q8N4Q0 377 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 CD177Q8N6Q3 437 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 ZNF525Q8N782 197 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 DAZAP1Q96EP5 407 aaKnown RBP7.32□□□□□ -1.24
LINC00558-201ENST00000569422 TMPRSS5Q9H3S3 457 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 KIAA1456Q9P272 454 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 WASF3Q9UPY6 502 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 DMXL2Q8TDJ6 3036 aa7.32□□□□□ -1.24
LINC00558-201ENST00000569422 ACACAQ13085 2346 aa7.31□□□□□ -1.24
LINC00558-201ENST00000569422 PCNX1Q96RV3 2341 aa7.31□□□□□ -1.24
LINC00558-201ENST00000569422 AQP7O14520 342 aa7.31□□□□□ -1.24
LINC00558-201ENST00000569422 RAB5AP20339 215 aa7.31□□□□□ -1.24
LINC00558-201ENST00000569422 PRDX2P32119 198 aa7.31□□□□□ -1.24
LINC00558-201ENST00000569422 TNFRSF9Q07011 255 aa7.31□□□□□ -1.24
LINC00558-201ENST00000569422 SMIM21Q3B7S5 101 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms