RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PLEKHJ1Q9NW61 149 aa2.33□□□□□ -2.04
HMGB1P6-201ENST00000569046 USE1Q9NZ43 259 aa2.33□□□□□ -2.04
HMGB1P6-201ENST00000569046 MTFP1Q9UDX5 166 aa2.33□□□□□ -2.04
HMGB1P6-201ENST00000569046 SHPKQ9UHJ6 478 aa2.33□□□□□ -2.04
HMGB1P6-201ENST00000569046 FIS1Q9Y3D6 152 aa2.33□□□□□ -2.04
HMGB1P6-201ENST00000569046 EPPK1P58107 5090 aaKnown RBP2.33□□□□□ -2.04
HMGB1P6-201ENST00000569046 DOCK11Q5JSL3 2073 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 TMED7-TICAM2A0A0A6YYA0 188 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 TRAV39A0A0B4J263 110 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 A0A1W2PQD3 144 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 A8MT66 165 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 TRIM49D1C9J1S8 452 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 M0R233 179 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 PLPP3O14495 311 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 RP2O75695 350 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 IGHV3-23P01764 117 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 CRYBA1P05813 215 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 RPS17P08708 135 aaKnown RBP2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 CD79AP11912 226 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZP3P21754 424 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 COX7A1P24310 79 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 ELK4P28324 431 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 CRABP2P29373 138 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 GRPRP30550 384 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 MAGEA2P43356 314 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 IDH2P48735 452 aaKnown RBP2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 PSMD7P51665 324 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 CLDN12P56749 244 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 TAS2R19P59542 299 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 DSTNP60981 165 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 LYZP61626 148 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 RPS23P62266 143 aaKnown RBP2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 SLC35A1P78382 337 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 RPL18AQ02543 176 aaKnown RBP2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 PRB3Q04118 309 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 TAF9Q16594 264 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 IMPG1Q17R60 797 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 PAGE3Q5JUK9 113 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 RBM48Q5RL73 367 aaKnown RBP2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 C8orf74Q6P047 294 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 C3orf33Q6P1S2 294 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 UGT2A3Q6UWM9 527 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 MOB1BQ7L9L4 216 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 HSD17B13Q7Z5P4 300 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 PDZD9Q8IXQ8 264 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 PNKDQ8N490 385 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 LFNGQ8NES3 379 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 DEFB108BQ8NET1 73 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR10J6PQ8NGY7 276 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 PIGXQ8TBF5 258 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 CCL17Q92583 94 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZHX1-C8orf76Q96EF9 292 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZIM3Q96PE6 472 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR7D2Q96RA2 312 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 SDF2Q99470 211 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 EMC6Q9BV81 110 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 SLIRPQ9GZT3 109 aaKnown RBP2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 NXF2Q9GZY0 626 aaKnown RBP2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 ABCB9Q9NP78 766 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 CCL28Q9NRJ3 127 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 TMEM216Q9P0N5 145 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 TAAR3PQ9P1P4 343 aa2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 TBL2Q9Y4P3 447 aaKnown RBP2.32□□□□□ -2.04
HMGB1P6-201ENST00000569046 WNK2Q9Y3S1 2297 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 TRAV40A0A0B4J280 105 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 IGHV1-69-2A0A0G2JMI3 117 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 IGHV3-64DA0A0J9YX35 117 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 KIR2DS1A0A191URI9 304 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 A0A1B0GTI1 187 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 CLPSL1A2RUU4 121 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 H0Y980 276 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 H3BNH8 94 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 GPR171O14626 319 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR5F1O95221 314 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 RAB36O95755 333 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 FABP3P05413 133 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 GNAO1P09471 354 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR5AL1P0C617 328 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 LINC00032P0C843 101 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 OCM2P0CE71 109 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 LIMS3P0CW19 117 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 LIMS4P0CW20 117 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR12D1P0DN82 309 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 CBR1P16152 277 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 F2RP25116 425 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 KRTAP5-9P26371 169 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 CEACAM6P40199 344 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 MDH2P40926 338 aaKnown RBP2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 RPL14P50914 215 aaKnown RBP2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 TMEM33P57088 247 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 TAS2R31P59538 309 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 TAS2R46P59540 309 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 PSPHP78330 225 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 H3F3AP84243 136 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 C2orf54Q08AI8 447 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 SKP2Q13309 424 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 KIR2DS1Q14954 304 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 RGNQ15493 299 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 PRSS8Q16651 343 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 CEACAM16Q2WEN9 425 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms