RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SPANXN5Q5MJ07 72 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 COMMD7Q86VX2 200 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 TCTEX1D1Q8N7M0 179 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 NEIL1Q96FI4 390 aaPredicted RBP5.79□□□□□ -1.48
SMG1-215ENST00000568239 LINC00574Q9H8X3 128 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 CHODLQ9H9P2 273 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.79□□□□□ -1.48
SMG1-215ENST00000568239 LYRM2Q9NU23 88 aaPredicted RBP5.79□□□□□ -1.48
SMG1-215ENST00000568239 PSENENQ9NZ42 101 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 ONECUT1Q9UBC0 465 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 MIOXQ9UGB7 285 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 MAP1AP78559 2803 aaPredicted RBP5.79□□□□□ -1.48
SMG1-215ENST00000568239 CENPEQ02224 2701 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 ITGB1BP1O14713 200 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 JTBO76095 146 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 IFNA17P01571 189 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 IGHV1-8P0DP01 117 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 GPR6P46095 362 aaPredicted RBP5.79□□□□□ -1.48
SMG1-215ENST00000568239 UBE2KP61086 200 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 TMEM30BQ3MIR4 351 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 WDR25Q64LD2 544 aaPredicted RBP5.79□□□□□ -1.48
SMG1-215ENST00000568239 ZNF841Q6ZN19 808 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 STX12Q86Y82 276 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 ABHD12Q8N2K0 398 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 ZNF383Q8NA42 475 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 HSD17B11Q8NBQ5 300 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 OR5C1Q8NGR4 320 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 OR4S2Q8NH73 311 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 STOML3Q8TAV4 291 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 RAB40CQ96S21 281 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 ZNF251Q9BRH9 671 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 TRBV23-1A0A0A0MS06 115 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 BORCS7-ASMTA0A0B4J1R7 106 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 CEBPZOSA8MTT3 80 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 METTL15P1P0C7V9 234 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 NQO2P16083 231 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 IGFBP2P18065 325 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 COX7A1P24310 79 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 THBS3P49746 956 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.78□□□□□ -1.48
SMG1-215ENST00000568239 OR10A7Q8NGE5 316 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 OR4A16Q8NH70 328 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 FAM216AQ8WUB2 273 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 PHYHIPLQ96FC7 376 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 WFDC1Q9HC57 220 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 A0A1W2PPH5 198 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 KIAA1324LA8MWY0 1029 aaPredicted RBP5.78□□□□□ -1.48
SMG1-215ENST00000568239 J3QR06 171 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 TXNL1O43396 289 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 OR9G9P0C7N8 305 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 CT45A6P0DMU7 189 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 CT45A5P0DMU8 189 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 CT45A7P0DMV0 189 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 DYNLT3P51808 116 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 PAX9P55771 341 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 RPS16P62249 146 aaKnown RBP5.78□□□□□ -1.48
SMG1-215ENST00000568239 TNFRSF9Q07011 255 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 DIAPH2-AS1Q14236 149 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 SLC25A24Q6NUK1 477 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 ADTRPQ96IZ2 230 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 RHOVQ96L33 236 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 SLC25A32Q9H2D1 315 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 RBKSQ9H477 322 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 SLC35D1Q9NTN3 355 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 PFDN2Q9UHV9 154 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 NUP50Q9UKX7 468 aa5.78□□□□□ -1.48
SMG1-215ENST00000568239 A1L4Q6 167 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 LINC00862A6NCI5 91 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 ZNF705EA8MWA4 302 aaPredicted RBP5.77□□□□□ -1.49
SMG1-215ENST00000568239 LEUTXA8MZ59 168 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 F12P00748 615 aaPredicted RBP5.77□□□□□ -1.49
SMG1-215ENST00000568239 IGKV1-16P04430 117 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 KIR2DS2P43631 304 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 ARF6P62330 175 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 RTL8BQ17RB0 113 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 OR8G2PQ6IF36 304 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 EIF5AL1Q6IS14 154 aaKnown RBP5.77□□□□□ -1.49
SMG1-215ENST00000568239 LILRB2Q8N423 598 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 ZNF525Q8N782 197 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 OR9G1Q8NH87 305 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 DDB2Q92466 427 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 SSBP3Q9BWW4 388 aaPredicted RBP5.77□□□□□ -1.49
SMG1-215ENST00000568239 QTRT1Q9BXR0 403 aaKnown RBP5.77□□□□□ -1.49
SMG1-215ENST00000568239 MRPL20Q9BYC9 149 aaKnown RBP5.77□□□□□ -1.49
SMG1-215ENST00000568239 TMEM133Q9H2Q1 129 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 FAM212BQ9NTI7 297 aaPredicted RBP5.77□□□□□ -1.49
SMG1-215ENST00000568239 TMEM140Q9NV12 185 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 COA4Q9NYJ1 87 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 GAB2Q9UQC2 676 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 WSB1Q9Y6I7 421 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 TRAV3A0A0B4J244 114 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 C22orf46C9J442 243 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 SHOXO15266 292 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 MED6O75586 246 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 MMP9P14780 707 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 EFNA4P52798 201 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 DLX6P56179 175 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 MIDNQ504T8 468 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 C11orf42Q8N5U0 333 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 DTD1Q8TEA8 209 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms