RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 VKORC1L1Q8N0U8 176 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 CADM4Q8NFZ8 388 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 SSMEM1Q8WWF3 244 aa17.22■□□□□ 0.35
MAP1LC3B-206ENST00000564844 POLEQ07864 2286 aa17.21■□□□□ 0.35
MAP1LC3B-206ENST00000564844 MDFIC2A0A1B0GVS7 189 aa17.21■□□□□ 0.35
MAP1LC3B-206ENST00000564844 IER3P46695 156 aa17.21■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TRA2AQ13595 282 aaKnown RBP eCLIP17.21■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TMEM106BQ9NUM4 274 aa17.21■□□□□ 0.35
MAP1LC3B-206ENST00000564844 TP53TG3Q9ULZ0 132 aa17.21■□□□□ 0.35
MAP1LC3B-206ENST00000564844 F6UZH7 168 aa17.21■□□□□ 0.35
MAP1LC3B-206ENST00000564844 CD82P27701 267 aa17.21■□□□□ 0.35
MAP1LC3B-206ENST00000564844 ALKBH6Q3KRA9 238 aa17.21■□□□□ 0.35
MAP1LC3B-206ENST00000564844 FAM90A10PA6NDY2 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A18PA6NE21 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A16PA6NEW6 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A20PA6NIJ5 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A8PA6NJQ4 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A7PA6NKC0 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A22PA8MWA6 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A12PA8MX19 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A5PA8MXJ8 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A23PA8MXZ1 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A15PP0C7V4 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A13PP0C7W8 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A14PP0C7W9 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FAM90A24PP0C7X0 464 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 CENPVQ7Z7K6 275 aaPredicted RBP17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 OCC1Q8TAD7 63 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SFRP2Q96HF1 295 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 NXPH2O95156 264 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SRD5A2P31213 254 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SOX8P57073 446 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 AESQ08117 197 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 COTL1Q14019 142 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 AGBL5Q8NDL9 886 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 Q8NFD4 153 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 APOBEC3DQ96AK3 386 aaPredicted RBP17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 TECTBQ96PL2 329 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 TUBG2Q9NRH3 451 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 ELOVL5Q9NYP7 299 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 MED13Q9UHV7 2174 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 TNCP24821 2201 aa17.2■□□□□ 0.34
MAP1LC3B-206ENST00000564844 WNT2P09544 360 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 COLCA1Q6ZS62 124 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 ATOH7Q8N100 152 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 C5orf30Q96GV9 206 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 LPAR2Q9HBW0 351 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SMG1Q96Q15 3661 aaKnown RBP17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 ARL14EPLP0DKL9 152 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 CRISP2P16562 243 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 MMDQ15546 238 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 ZNF826PQ6ZT77 177 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 BTF3L4Q96K17 158 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 VAMP8Q9BV40 100 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 ABCA1O95477 2261 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 KIR2DL5BA0A0G2JN68 375 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 KIR2DL5BA0A0G2JPC4 375 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 LRRC30A6NM36 301 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 WNT9BO14905 357 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 TCL1AP56279 114 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 GNG3P63215 75 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 DCAF10Q5QP82 559 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 KIR2DL5AQ8N109 375 aa17.19■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FCN1O00602 326 aa17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 AQP7O14520 342 aa17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 RIMS4Q9H426 269 aaPredicted RBP17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SH2D1BO14796 132 aa17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SYNGR4O95473 234 aa17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 MT-CO3P00414 261 aa17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 LINC00310P59036 64 aa17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 MIC13Q5XKP0 118 aa17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 H2BFWTQ7Z2G1 175 aa17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 ZNF573Q86YE8 665 aa17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SVIPQ8NHG7 77 aa17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 MRGPRDQ8TDS7 321 aa17.18■□□□□ 0.34
MAP1LC3B-206ENST00000564844 LY6G6EA0A0G2JKS1 128 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 LRP5LA4QPB2 252 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 IGHEP01854 428 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 BRS3P32247 399 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 OR2J1Q9GZK6 312 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 MRPL18Q9H0U6 180 aaKnown RBP17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 U3KQA8 63 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 PMCHP20382 165 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 Q0VFX4 171 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 KRTCAP3Q53RY4 240 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 DCTN5Q9BTE1 182 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 ADAMTS20P59510 1910 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 CEP192Q8TEP8 1941 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 PSPNO60542 156 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 TYMSP04818 313 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 Q6P435 159 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 LINC00696Q6ZRV3 163 aa17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 UBE2ZQ9H832 354 aaPredicted RBP17.17■□□□□ 0.34
MAP1LC3B-206ENST00000564844 RRHO14718 337 aa17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 CLDN14O95500 239 aa17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 PLP2Q04941 152 aa17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 TPTE2P1Q5T6R2 138 aa17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 RIPPLY2Q5TAB7 128 aa17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 WDR86Q86TI4 376 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms