RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 LGALSLQ3ZCW2 172 aaPredicted RBP3.05□□□□□ -1.92
SMG1-204ENST00000561940 PYDC2Q56P42 97 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 OR4A5Q8NH83 315 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 DNAJB3Q8WWF6 145 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 IGF2BP2-AS1Q96M15 143 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 TMEM56Q96MV1 263 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 TM2D3Q9BRN9 247 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 EBPLQ9BY08 206 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 OR2D2Q9H210 308 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 F8P00451 2351 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 ASCC3Q8N3C0 2202 aaKnown RBP3.05□□□□□ -1.92
SMG1-204ENST00000561940 GREB1Q4ZG55 1949 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 NLRC5Q86WI3 1866 aa3.05□□□□□ -1.92
SMG1-204ENST00000561940 MTORP42345 2549 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 TMEM213A2RRL7 107 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 OR5H14A6NHG9 310 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 FGF16O43320 207 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 CYTH3O43739 400 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 CALUO43852 315 aaPredicted RBP3.04□□□□□ -1.92
SMG1-204ENST00000561940 POP7O75817 140 aaKnown RBP3.04□□□□□ -1.92
SMG1-204ENST00000561940 CPSF4O95639 269 aaKnown RBP3.04□□□□□ -1.92
SMG1-204ENST00000561940 ZNF708P17019 499 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 SLC19A3Q9BZV2 496 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 TRIM4Q9C037 500 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 ASCL3Q9NQ33 180 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 C1orf109Q9NX04 203 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 OR5V1Q9UGF6 321 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 FBXL3Q9UKT7 428 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 SCML1Q9UN30 329 aa3.04□□□□□ -1.92
SMG1-204ENST00000561940 SPTBN1Q01082 2364 aaKnown RBP3.04□□□□□ -1.92
SMG1-204ENST00000561940 DOCK6Q96HP0 2047 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 DLG5Q8TDM6 1919 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 SIPA1L1O43166 1804 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 IGKV3D-11A0A0A0MRZ8 115 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 VPS37CA5D8V6 355 aaPredicted RBP3.03□□□□□ -1.92
SMG1-204ENST00000561940 TMEM250H0YL14 139 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 J3QLI3 93 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 GPR171O14626 319 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 PHYHO14832 338 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 LIN7AO14910 233 aaPredicted RBP3.03□□□□□ -1.92
SMG1-204ENST00000561940 UGT2B11O75310 529 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 RAB36O95755 333 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 CTLA4P16410 223 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 CRATP43155 626 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 MP68P56378 58 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 RAB8AP61006 207 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 BCL2A1Q16548 175 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 XKRXQ6PP77 449 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 Q6ZS52 159 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 LYPD6Q86Y78 171 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 EIF4E3Q8N5X7 224 aaKnown RBP3.03□□□□□ -1.92
SMG1-204ENST00000561940 OR7G1Q8NGA0 311 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 MUC7Q8TAX7 377 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 MBOAT7Q96N66 472 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 POTEKPQ9BYX7 375 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 LAMA5O15230 3695 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 LCTP09848 1927 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 ATG2AQ2TAZ0 1938 aa3.03□□□□□ -1.92
SMG1-204ENST00000561940 TLN1Q9Y490 2541 aaKnown RBP3.02□□□□□ -1.93
SMG1-204ENST00000561940 ITPR2Q14571 2701 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 FN1P02751 2386 aaKnown RBP3.02□□□□□ -1.93
SMG1-204ENST00000561940 CELSR3Q9NYQ7 3312 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 MCM3APO60318 1980 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 IGKV1D-37A0A075B6S9 117 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 EFCAB9A8MZ26 197 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 GGTLC3B5MD39 225 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 C9J4A7 227 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 TOR1AO14656 332 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 PDYNP01213 254 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 RCVRNP35243 200 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 TAF9Q16594 264 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 HES3Q5TGS1 186 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 Q6ZQT7 251 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 DYNC2LI1Q8TCX1 351 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 B9D2Q9BPU9 175 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 PATJQ8NI35 1801 aa3.02□□□□□ -1.93
SMG1-204ENST00000561940 ZNF638Q14966 1978 aaKnown RBP3.01□□□□□ -1.93
SMG1-204ENST00000561940 GOLGA4Q13439 2230 aaKnown RBP3.01□□□□□ -1.93
SMG1-204ENST00000561940 CCDC171Q6TFL3 1326 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 CDK14O94921 469 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 OCMP0CE72 109 aaPredicted RBP3.01□□□□□ -1.93
SMG1-204ENST00000561940 PVALBP20472 110 aaPredicted RBP3.01□□□□□ -1.93
SMG1-204ENST00000561940 CRABP2P29373 138 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 SNAP25P60880 206 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 DHRS2Q13268 280 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 TCF23Q7RTU1 214 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 SLC13A5Q86YT5 568 aaPredicted RBP3.01□□□□□ -1.93
SMG1-204ENST00000561940 CPNE9Q8IYJ1 553 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 MUC15Q8N387 334 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 RPRMLQ8N4K4 120 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 OR11G2Q8NGC1 345 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 OR11L1Q8NGX0 322 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 APOBEC3DQ96AK3 386 aaPredicted RBP3.01□□□□□ -1.93
SMG1-204ENST00000561940 PYURFQ96I23 114 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 TRIB3Q96RU7 358 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 PKMYT1Q99640 499 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 UGT2B28Q9BY64 529 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 ABCG5Q9H222 651 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 DMAC2Q9NW81 257 aa3.01□□□□□ -1.93
SMG1-204ENST00000561940 ICE1Q9Y2F5 2266 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms