RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 TMEM56Q96MV1 263 aa8.53□□□□□ -1.04
TUBGCP4-202ENST00000561691 OR2V2Q96R30 315 aa8.53□□□□□ -1.04
TUBGCP4-202ENST00000561691 MEMO1Q9Y316 297 aa8.53□□□□□ -1.04
TUBGCP4-202ENST00000561691 TMEM56-RWDD3S4R434 201 aa8.53□□□□□ -1.04
TUBGCP4-202ENST00000561691 YLPM1P49750 1951 aaKnown RBP8.53□□□□□ -1.04
TUBGCP4-202ENST00000561691 CHD3Q12873 2000 aaKnown RBP8.53□□□□□ -1.04
TUBGCP4-202ENST00000561691 PCNX1Q96RV3 2341 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 TMEM238LA0A1B0GVL6 79 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 RBFOX3A6NFN3 312 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 B4DEV8 164 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 TCF21O43680 179 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 DEDDO75618 318 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 DIRAS3O95661 229 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 IGHV1-46P01743 117 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 WNT2P09544 360 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 PSG2P11465 335 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 TMEM11P17152 192 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 PDLIM4P50479 330 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 COL10A1Q03692 680 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 SLC35E4Q6ICL7 350 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 VHLLQ6RSH7 139 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 TBC1D26Q86UD7 250 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 OR4X1Q8NH49 305 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 UBALD1Q8TB05 177 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 SMIM3Q9BZL3 60 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 TMEM222Q9H0R3 208 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 GSX1Q9H4S2 264 aaPredicted RBP8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 WFDC1Q9HC57 220 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 TAAR3PQ9P1P4 343 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 POLR3KQ9Y2Y1 108 aaPredicted RBP8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 OR2W1Q9Y3N9 320 aa8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.04
TUBGCP4-202ENST00000561691 C3orf85A0A1B0GTC6 90 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 C12orf77C9JDV5 145 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 DLL1O00548 723 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 SIAH2O43255 324 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 C1QL1O75973 258 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 IRF2P14316 349 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 CA7P43166 264 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 P2RY1P47900 373 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 AESQ08117 197 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 KLRB1Q12918 225 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 ADIPOQQ15848 244 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 ABCA11PQ4W5N1 156 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 SP5Q6BEB4 398 aaPredicted RBP8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 BTNL3Q6UXE8 466 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 FAM90A1Q86YD7 464 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 FAM185AQ8N0U4 392 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 FAM222BQ8WU58 562 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 ITLN1Q8WWA0 313 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 C5orf30Q96GV9 206 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 WFIKKN1Q96NZ8 548 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 C11orf1Q9H5F2 150 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 METTL8Q9H825 291 aaKnown RBP8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 TMEM242Q9NWH2 141 aa8.52□□□□□ -1.05
TUBGCP4-202ENST00000561691 NBEAQ8NFP9 2946 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 BORCS7-ASMTA0A0B4J1R7 106 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 TMEM30CPA0ZSE6 113 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 PHF1O43189 567 aaPredicted RBP8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 SPRY3O43610 288 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 PGLYRP1O75594 196 aaPredicted RBP8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 SCAF4O95104 1147 aaKnown RBP8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 UCP1P25874 307 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 PRDX2P32119 198 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 BSPH1Q075Z2 132 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 CDSNQ15517 529 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 IAH1Q2TAA2 248 aaPredicted RBP8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 SMIM21Q3B7S5 101 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 SPSB3Q6PJ21 355 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 MOGAT3Q86VF5 341 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 WFDC8Q8IUA0 241 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 TGIF2LYQ8IUE0 185 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 SELENOHQ8IZQ5 122 aaKnown RBP8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 CCDC71LQ8N9Z2 235 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 OR1L1Q8NH94 360 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 RND1Q92730 232 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 PRORYQ9H606 182 aa8.51□□□□□ -1.05
TUBGCP4-202ENST00000561691 C15orf65H3BRN8 121 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 CDS2O95674 445 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 ADH4P08319 380 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 RPL29P47914 159 aaKnown RBP8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 CCL20P78556 96 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 RBPJQ06330 500 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 MZT1Q08AG7 82 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 EIF4EBP1Q13541 118 aaPredicted RBP8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 ICAM4Q14773 271 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 TMEM108Q6UXF1 575 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 LGI3Q8N145 548 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 ST6GALNAC3Q8NDV1 305 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 OR4D5Q8NGN0 318 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 OR13A1Q8NGR1 328 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 Q8TCH9 128 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 FAM122AQ96E09 287 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 NIPSNAP3BQ9BS92 247 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 SH3BGRL3Q9H299 93 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 SRD5A3Q9H8P0 318 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 DNAJC4Q9NNZ3 241 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 GCM1Q9NP62 436 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 GSKIPQ9P0R6 139 aa8.5□□□□□ -1.05
TUBGCP4-202ENST00000561691 ERRFI1Q9UJM3 462 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms