RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CHST5Q9GZS9 411 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 KIAA1217Q5T5P2 1943 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 PIK3C2AO00443 1686 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 CKAP5Q14008 2032 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 FOXI3A8MTJ6 420 aaPredicted RBP11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 TP53BP1Q12888 1972 aaPredicted RBP11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 SSBP2P81877 361 aaPredicted RBP11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 CENPVQ7Z7K6 275 aaPredicted RBP11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 SCN1AP35498 2009 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 OVOL2Q9BRP0 275 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 CST9LQ9H4G1 147 aa11.99□□□□□ -0.49
CSPG4P12-202ENST00000559989 FAM90A26D6RGX4 464 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 GPR183P32249 361 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 WDR82Q6UXN9 313 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 DTX2Q86UW9 622 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 FMC1Q96HJ9 113 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 MYO5AQ9Y4I1 1855 aaKnown RBP11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 SNRPCP09234 159 aaKnown RBP11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 ALX4Q9H161 411 aaPredicted RBP11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 TOPAZ1Q8N9V7 1692 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 A0A1W2PP11 408 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 METTL12A8MUP2 240 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 MIC13Q5XKP0 118 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 SEMA5BQ9P283 1151 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 CEACAM5P06731 702 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 SERGEFQ9UGK8 458 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 VEGFBP49765 207 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 RUNX1Q01196 453 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 CENPWQ5EE01 88 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 ZNF818PQ6ZRF7 136 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 ESPL1Q14674 2120 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 C16orf97H3BN30 126 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 H3BUT2 72 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 M0R2P5 195 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 COX6B1P14854 86 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 RND2P52198 227 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 HIST1H2BAQ96A08 127 aa11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 ZNF71Q9NQZ8 489 aaPredicted RBP11.98□□□□□ -0.49
CSPG4P12-202ENST00000559989 PRRT4C9JH25 899 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 OR10J3Q5JRS4 329 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 IGKV3-20P01619 116 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 FBLN7Q53RD9 439 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 HCSTQ9UBK5 93 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 MBD1Q9UIS9 605 aaPredicted RBP11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 KLK13Q9UKR3 277 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 PQLC2LA1A4F0 135 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 NPIPB4C9JG80 1138 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 TNFRSF6BO95407 300 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 CD8AP01732 235 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 ZNF585BQ52M93 769 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 HEATR1Q9H583 2144 aaKnown RBP11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 IFI27P40305 119 aaPredicted RBP11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 APOBEC4Q8WW27 367 aaKnown RBP11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 KMT2EQ8IZD2 1858 aa11.97□□□□□ -0.49
CSPG4P12-202ENST00000559989 A0A1W2PPE3 182 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 M0R381 172 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 PNLIPP16233 465 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 VAX1Q5SQQ9 334 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 MS4A4AQ96JQ5 239 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 IGKV3D-20A0A0C4DH25 116 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 LEPP41159 167 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 CD69Q07108 199 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 TDRD15B5MCY1 1934 aaKnown RBP11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 RP1P56715 2156 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 KCNE1BA0A087WTH5 132 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 LIPT2A6NK58 231 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 GUSBP11Q6P575 273 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 LOC390937A0A1W2PQ73 354 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 ZNF146Q15072 292 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 NKG7Q16617 165 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 Q6AWC8 147 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 IL36BQ9NZH7 164 aa11.96□□□□□ -0.49
CSPG4P12-202ENST00000559989 SNAI2O43623 268 aa11.96□□□□□ -0.5
CSPG4P12-202ENST00000559989 A0A1W2PQD3 144 aa11.96□□□□□ -0.5
CSPG4P12-202ENST00000559989 F8WEM9 126 aa11.96□□□□□ -0.5
CSPG4P12-202ENST00000559989 CA7P43166 264 aa11.96□□□□□ -0.5
CSPG4P12-202ENST00000559989 SPEM1Q8N4L4 309 aa11.96□□□□□ -0.5
CSPG4P12-202ENST00000559989 IDI2-AS1Q9NZ38 188 aa11.96□□□□□ -0.5
CSPG4P12-202ENST00000559989 ST6GALNAC2Q9UJ37 374 aa11.96□□□□□ -0.5
CSPG4P12-202ENST00000559989 ASB1Q9Y576 335 aa11.96□□□□□ -0.5
CSPG4P12-202ENST00000559989 RBMY1FQ15415 496 aaKnown RBP11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 TBR1Q16650 682 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 GAGE13Q4V321 117 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 FAM57AQ8TBR7 257 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 SPEM2Q0P670 501 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 GGTLC2Q14390 218 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 HIKESHIQ53FT3 197 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 LINC00305Q7Z4B0 112 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 TMEM222Q9H0R3 208 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 WDR54Q9H977 334 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 TRBV5-4A0A0C4DH59 114 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 VENTXO95231 258 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 CBLN1P23435 193 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 ST6GALNAC3Q8NDV1 305 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 GPR146Q96CH1 333 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 ZNF488Q96MN9 340 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 TJP1Q07157 1748 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 TRAV2A0A0B4J234 112 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 A0A1B0GUT8 65 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 TSPAN7P41732 249 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms