RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ATP6V0CP27449 155 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 RPL5P46777 297 aaKnown RBP2.17□□□□□ -2.06
SPG11-218ENST00000559754 AKR1C2P52895 323 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 CRYBA4P53673 196 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 TFAMQ00059 246 aaKnown RBP2.17□□□□□ -2.06
SPG11-218ENST00000559754 IL15RAQ13261 267 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 ALX1Q15699 326 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 ARHGAP11BQ3KRB8 267 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 SMARCD3Q6STE5 483 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 SGPP2Q8IWX5 399 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 BAP18Q8IXM2 172 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 C1orf174Q8IYL3 243 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 ZNF664Q8N3J9 261 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 C3orf22Q8N5N4 141 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 TMEM105Q8N8V8 129 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 OR52L1Q8NGH7 329 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 OR2T4Q8NH00 348 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 RTN4IP1Q8WWV3 396 aaPredicted RBP2.17□□□□□ -2.06
SPG11-218ENST00000559754 FRZBQ92765 325 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 CNBD2Q96M20 576 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 KLF6Q99612 283 aaPredicted RBP2.17□□□□□ -2.06
SPG11-218ENST00000559754 DDA1Q9BW61 102 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 TSSK6Q9BXA6 273 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 C1QTNF6Q9BXI9 259 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 KCNIP2Q9NS61 270 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 RSL24D1Q9UHA3 163 aaKnown RBP2.17□□□□□ -2.06
SPG11-218ENST00000559754 RPUSD1Q9UJJ7 312 aaKnown RBP2.17□□□□□ -2.06
SPG11-218ENST00000559754 PHLDA3Q9Y5J5 127 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 TRAPPC1Q9Y5R8 145 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 MYH2Q9UKX2 1941 aa2.17□□□□□ -2.06
SPG11-218ENST00000559754 THADAQ6YHU6 1953 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 RPRD2Q5VT52 1461 aaKnown RBP2.16□□□□□ -2.06
SPG11-218ENST00000559754 RTL1A6NKG5 1358 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 NUP155O75694 1391 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 TRAV26-2A0A0B4J265 109 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 KNCNA6PVL3 124 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 A8MWP4 228 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.16□□□□□ -2.06
SPG11-218ENST00000559754 MED6O75586 246 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 ATG12O94817 140 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 IL4P05112 153 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 IFI30P13284 250 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 HSPE1P61604 102 aaKnown RBP2.16□□□□□ -2.06
SPG11-218ENST00000559754 TNFAIP6P98066 277 aaPredicted RBP2.16□□□□□ -2.06
SPG11-218ENST00000559754 TNFRSF9Q07011 255 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 BSPH1Q075Z2 132 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 FUT5Q11128 374 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 UMODL1-AS1Q8N2C9 162 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 SLC35F6Q8N357 371 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 SLC22A24Q8N4F4 322 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 APCDD1LQ8NCL9 501 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 OR11G2Q8NGC1 345 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 OR8B12Q8NGG6 310 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 PYDC1Q8WXC3 89 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 ROPN1LQ96C74 230 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 ZHX1-C8orf76Q96EF9 292 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 GNPNAT1Q96EK6 184 aaPredicted RBP2.16□□□□□ -2.06
SPG11-218ENST00000559754 LINC00477Q96M19 166 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 NKX6-2Q9C056 277 aaPredicted RBP2.16□□□□□ -2.06
SPG11-218ENST00000559754 GABARAPL1Q9H0R8 117 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 PRTFDC1Q9NRG1 225 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 C19orf12Q9NSK7 152 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 CMTM6Q9NX76 183 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 TAAR3PQ9P1P4 343 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 ZNF230Q9UIE0 474 aaPredicted RBP2.16□□□□□ -2.06
SPG11-218ENST00000559754 AK3Q9UIJ7 227 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 DOCK3Q8IZD9 2030 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 KIF1BO60333 1816 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 FHAD1B1AJZ9 1412 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 NLRC5Q86WI3 1866 aa2.16□□□□□ -2.06
SPG11-218ENST00000559754 PCM1Q15154 2024 aa2.15□□□□□ -2.06
SPG11-218ENST00000559754 BAZ1BQ9UIG0 1483 aaKnown RBP2.15□□□□□ -2.06
SPG11-218ENST00000559754 DHX57Q6P158 1386 aaKnown RBP2.15□□□□□ -2.07
SPG11-218ENST00000559754 FAM236DA0A1B0GTK5 79 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 EXOC1LA0A1B0GW35 172 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 A0A1W2PQ67 120 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 HLA-DRB1P01911 266 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 SERPINA7P05543 415 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 PFN1P07737 140 aaKnown RBP2.15□□□□□ -2.07
SPG11-218ENST00000559754 FAM236CP0DP71 79 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 CD34P28906 385 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 TAS2R41P59536 307 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 TAS2R45P59539 299 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 ARPC4P59998 168 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 GNG3P63215 75 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 DEFA6Q01524 100 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 ZNF616Q08AN1 781 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 APOFQ13790 326 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 TSNQ15631 228 aaKnown RBP2.15□□□□□ -2.07
SPG11-218ENST00000559754 MOGQ16653 247 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 C3orf33Q6P1S2 294 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 ZFP2Q6ZN57 461 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 DAZ4Q86SG3 579 aaKnown RBP2.15□□□□□ -2.07
SPG11-218ENST00000559754 RPRMLQ8N4K4 120 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 ZNF561Q8N587 486 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 ZNF615Q8N8J6 731 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 ST20-AS1Q8NBB2 130 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 CT55Q8WUE5 264 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 RBPMSQ93062 196 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms