RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 A8MV72 311 aaPredicted RBP13.62□□□□□ -0.23
SNX1-203ENST00000558040 S1PR2O95136 353 aa13.62□□□□□ -0.23
SNX1-203ENST00000558040 CRYZL1O95825 349 aa13.62□□□□□ -0.23
SNX1-203ENST00000558040 HOXB5P09067 269 aa13.62□□□□□ -0.23
SNX1-203ENST00000558040 HLA-GP17693 338 aa13.62□□□□□ -0.23
SNX1-203ENST00000558040 AKR1C2P52895 323 aa13.62□□□□□ -0.23
SNX1-203ENST00000558040 BRWD1-AS2P59051 145 aa13.62□□□□□ -0.23
SNX1-203ENST00000558040 ERVK-16P61578 105 aa13.62□□□□□ -0.23
SNX1-203ENST00000558040 RUSC1-AS1Q66K80 236 aa13.62□□□□□ -0.23
SNX1-203ENST00000558040 PIP4P2Q8N4L2 257 aa13.62□□□□□ -0.23
SNX1-203ENST00000558040 OR4C13Q8NGP0 309 aa13.62□□□□□ -0.23
SNX1-203ENST00000558040 RRNAD1Q96FB5 475 aaKnown RBP13.62□□□□□ -0.23
SNX1-203ENST00000558040 ITPR2Q14571 2701 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 TIMM23O14925 209 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 HRASP01112 189 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 VDAC1P21796 283 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 CD1BP29016 333 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 KLF17Q5JT82 389 aaPredicted RBP13.61□□□□□ -0.23
SNX1-203ENST00000558040 GSG1LQ6UXU4 331 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 BRD3OSQ6XYD6 125 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 SPNS3Q6ZMD2 512 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 LYZL2Q7Z4W2 148 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 OR11H7Q8NGC8 314 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 OR5M8Q8NGP6 311 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 OSR1Q8TAX0 266 aaPredicted RBP13.61□□□□□ -0.23
SNX1-203ENST00000558040 FLYWCH2Q96CP2 140 aaKnown RBP13.61□□□□□ -0.23
SNX1-203ENST00000558040 NUP50Q9UKX7 468 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 FAM96BQ9Y3D0 163 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 CCDC168Q8NDH2 2452 aa13.61□□□□□ -0.23
SNX1-203ENST00000558040 C5orf51A6NDU8 294 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 FAM25EA8MYX2 175 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 ADAP1O75689 374 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 IGKV1-39P01597 117 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 IGKV1D-39P04432 117 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 NQO2P16083 231 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 BRS3P32247 399 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 HABP2Q14520 560 aaPredicted RBP13.6□□□□□ -0.23
SNX1-203ENST00000558040 GGNBP1Q5YKI7 109 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 AKAP14Q86UN6 197 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 FAM219AQ8IW50 185 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 C17orf50Q8WW18 174 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 ASB13Q8WXK3 278 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 LSM10Q969L4 123 aaKnown RBP13.6□□□□□ -0.23
SNX1-203ENST00000558040 R3HDM4Q96D70 268 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 SPIN2AQ99865 258 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 SPIN2BQ9BPZ2 258 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 PDCD10Q9BUL8 212 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 CREBBPQ92793 2442 aa13.6□□□□□ -0.23
SNX1-203ENST00000558040 IGHV3-72A0A0B4J1Y9 119 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 C13orf42A0A1B0GVH6 325 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 MARCH11A6NNE9 402 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 CCSO14618 274 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 SHOXO15266 292 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 KRASP01116 189 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 FSHBP01225 129 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 IGKV1-16P04430 117 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 FBP1P09467 338 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 CXCL3P19876 107 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 KRTAP1-1Q07627 177 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 TMEM177Q53S58 311 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 THOC7Q6I9Y2 204 aaKnown RBP13.59□□□□□ -0.23
SNX1-203ENST00000558040 DYNAPQ8N1N2 210 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 DMBX1Q8NFW5 382 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 CFHR4Q92496 578 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 AJUBAQ96IF1 538 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 SEC22AQ96IW7 307 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 HARBI1Q96MB7 349 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 ZNF436Q9C0F3 470 aaPredicted RBP13.59□□□□□ -0.23
SNX1-203ENST00000558040 MS4A7Q9GZW8 240 aaPredicted RBP13.59□□□□□ -0.23
SNX1-203ENST00000558040 MMP24Q9Y5R2 645 aa13.59□□□□□ -0.23
SNX1-203ENST00000558040 A0A0U1RQK1 487 aa13.58□□□□□ -0.24
SNX1-203ENST00000558040 PFDN1O60925 122 aa13.58□□□□□ -0.24
SNX1-203ENST00000558040 CCNKO75909 580 aa13.58□□□□□ -0.24
SNX1-203ENST00000558040 VENTXO95231 258 aa13.58□□□□□ -0.24
SNX1-203ENST00000558040 G6PCP35575 357 aa13.58□□□□□ -0.24
SNX1-203ENST00000558040 LGALS7P47929 136 aa13.58□□□□□ -0.24
SNX1-203ENST00000558040 RPS16P62249 146 aaKnown RBP13.58□□□□□ -0.24
SNX1-203ENST00000558040 CYCSP99999 105 aaKnown RBP13.58□□□□□ -0.24
SNX1-203ENST00000558040 C2orf68Q2NKX9 166 aa13.58□□□□□ -0.24
SNX1-203ENST00000558040 NMSQ5H8A3 153 aa13.58□□□□□ -0.24
SNX1-203ENST00000558040 H2BFWTQ7Z2G1 175 aa13.58□□□□□ -0.24
SNX1-203ENST00000558040 RNF5Q99942 180 aa13.58□□□□□ -0.24
SNX1-203ENST00000558040 YAE1D1Q9NRH1 226 aa13.58□□□□□ -0.24
SNX1-203ENST00000558040 SIX6O95475 246 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 MOSP00540 346 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 IGKV1-5P01602 117 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 GIPP09681 153 aaPredicted RBP13.57□□□□□ -0.24
SNX1-203ENST00000558040 FAM106CPP0CH98 169 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 SLC25A6P12236 298 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 FOSL1P15407 271 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 HNF1AP20823 631 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 CD83Q01151 205 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 POU2AF1Q16633 256 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 OR2T10Q8NGZ9 312 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 RHOVQ96L33 236 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 C2orf50Q96LR7 162 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 TSNAXQ99598 290 aaKnown RBP13.57□□□□□ -0.24
SNX1-203ENST00000558040 MEGF9Q9H1U4 602 aa13.57□□□□□ -0.24
SNX1-203ENST00000558040 A0A1B0GU03 582 aa13.56□□□□□ -0.24
SNX1-203ENST00000558040 FAM90A9PA6NNJ1 464 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms