RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TRAV8-6A0A0B4J262 113 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 NXPH1P58417 271 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 HCFC1R1Q9NWW0 138 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 IMMP2LQ96T52 175 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 EDA2RQ9HAV5 297 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 ST20Q9HBF5 79 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 SLC25A10Q9UBX3 287 aaPredicted RBP7.7□□□□□ -1.18
SYNE3-205ENST00000557275 TBC1D29Q9UFV1 150 aa7.7□□□□□ -1.18
SYNE3-205ENST00000557275 OR9G4Q8NGQ1 327 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 BDP1A6H8Y1 2624 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 INAFM2P0DMQ5 153 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 CTAG1AP78358 180 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 ORMDL2Q53FV1 153 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 NTMQ9P121 344 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 OR10J3Q5JRS4 329 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 PLPP3O14495 311 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 IFITM2Q01629 132 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 ZNF774Q6NX45 483 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 ASB10Q8WXI3 467 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 SCGB3A1Q96QR1 104 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 FOXC2Q99958 501 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 SARGQ9BW04 601 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 TCRBV16S1A1N1A0A5B0 115 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 FAM157AC9JC47 383 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 CADM4Q8NFZ8 388 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 MIXL1Q9H2W2 232 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 SDF2L1Q9HCN8 221 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 SOSTQ9BQB4 213 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 CHAC1Q9BUX1 264 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 ZFP64Q9NPA5 681 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 RPRMQ9NS64 109 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 ALS2Q96Q42 1657 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 A0A1W2PQD3 144 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 VWC2LB2RUY7 222 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 SYNGR3O43761 229 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 TMIGD3P0DMS9 266 aaPredicted RBP7.69□□□□□ -1.18
SYNE3-205ENST00000557275 Q5PR19 223 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 TMEM106BQ9NUM4 274 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 KCNE3Q9Y6H6 103 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 H3BMM0 161 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 CXorf67Q86X51 503 aaPredicted RBP7.69□□□□□ -1.18
SYNE3-205ENST00000557275 TDHQ8IZJ6 230 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 PAAF1Q9BRP4 392 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 ARL14EPLP0DKL9 152 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 ZNF658BQ4V348 819 aaPredicted RBP7.69□□□□□ -1.18
SYNE3-205ENST00000557275 HIKESHIQ53FT3 197 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 GLCCI1Q86VQ1 547 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 TBL2Q9Y4P3 447 aaKnown RBP7.69□□□□□ -1.18
SYNE3-205ENST00000557275 SMAD4Q13485 552 aaKnown RBP7.69□□□□□ -1.18
SYNE3-205ENST00000557275 HOGA1Q86XE5 327 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 GATAD1Q8WUU5 269 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 NPIPB4C9JG80 1138 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 SPNP16150 400 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 EMDP50402 254 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 RPL32P62910 135 aaKnown RBP7.69□□□□□ -1.18
SYNE3-205ENST00000557275 WIPI1Q5MNZ9 446 aaPredicted RBP7.69□□□□□ -1.18
SYNE3-205ENST00000557275 PGLYRP4Q96LB8 373 aa7.69□□□□□ -1.18
SYNE3-205ENST00000557275 EIF3GO75821 320 aaKnown RBP eCLIP7.68□□□□□ -1.18
SYNE3-205ENST00000557275 RPL27AP46776 148 aaKnown RBP7.68□□□□□ -1.18
SYNE3-205ENST00000557275 RHOGP84095 191 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 ZNF236Q9UL36 1845 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 WNK3Q9BYP7 1800 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 C3orf80F5H4A9 247 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 OGG1O15527 345 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 TMEM258P61165 79 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 MGAT2Q10469 447 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 NPCDR1Q9BY65 106 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 RPL36A-HNRNPH2H7BZ11 118 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 CLDN14O95500 239 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 DEFB123Q8N688 67 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 RFESDQ8TAC1 157 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 HCFC2Q9Y5Z7 792 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 MALRD1Q5VYJ5 2156 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 KIAA1644Q3SXP7 199 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 KCPQ6ZWJ8 1503 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 MUC1P15941 1255 aaPredicted RBP7.68□□□□□ -1.18
SYNE3-205ENST00000557275 MZB1Q8WU39 189 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 TNFRSF19Q9NS68 423 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 SHISA7A6NL88 538 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 TNFSF15O95150 251 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 NEU1Q99519 415 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 BCORQ6W2J9 1755 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 SELENOPP49908 381 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 SSBP2P81877 361 aaPredicted RBP7.68□□□□□ -1.18
SYNE3-205ENST00000557275 ZNF585BQ52M93 769 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 ZNF818PQ6ZRF7 136 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 TAF15Q92804 592 aaKnown RBP eCLIP7.68□□□□□ -1.18
SYNE3-205ENST00000557275 LINC00614P0C842 121 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 DANCRP0C864 163 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 CTSSP25774 331 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 C6orf106Q9H6K1 298 aaPredicted RBP7.68□□□□□ -1.18
SYNE3-205ENST00000557275 A0A0G2JLM5 398 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 M0R2P5 195 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 RHOVQ96L33 236 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 DOCK4Q8N1I0 1966 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 FFAR1O14842 300 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 CDAP32320 146 aa7.68□□□□□ -1.18
SYNE3-205ENST00000557275 TAF1P21675 1872 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 GPR183P32249 361 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 SPINK9Q5DT21 86 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms