RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 GJE1A6NN92 205 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 C17orf51A8MQB3 221 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 VSTM5A8MXK1 200 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF814B7Z6K7 855 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 C11orf94C9JXX5 98 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 C5orf67F2Z3F1 127 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 TNFSF11O14788 317 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 EFNA2O43921 213 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 PAGE4O60829 102 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 ZFAND5O76080 213 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 OR7C1O76099 320 aaPredicted RBP2.41□□□□□ -2.02
SLIRP-208ENST00000556956 TOMM40O96008 361 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 MT-CO2P00403 227 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 IGKV1D-12P01611 117 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 SCTP09683 121 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 OR5G3P0C626 314 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 IAPPP10997 89 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 HNF1AP20823 631 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 IL3RAP26951 378 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 FASLGP48023 281 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 HNRNPA3P51991 378 aaKnown RBP2.41□□□□□ -2.02
SLIRP-208ENST00000556956 UBE2G2P60604 165 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 FGF12P61328 243 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 PCBD1P61457 104 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 GNB2P62879 340 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 RPP30P78346 268 aaKnown RBP2.41□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF90Q03938 601 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 ARL16Q0P5N6 197 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 C1orf61Q13536 156 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 PMCHL1Q16048 86 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 HLA-DRB5Q30154 266 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 SNAI3Q3KNW1 292 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 PIGYQ3MUY2 71 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 SPATA45Q537H7 98 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 OR10J3Q5JRS4 329 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 SPANXN5Q5MJ07 72 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 FFAR4Q5NUL3 377 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 TPTE2P1Q5T6R2 138 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 FAM27BQ5VT28 67 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 PLCXD3Q63HM9 321 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM42Q69YG0 159 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 RHBDD2Q6NTF9 364 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 WDR73Q6P4I2 378 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 PET117Q6UWS5 81 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 Q6ZN92 141 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 C19orf35Q6ZS72 473 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM144Q7Z5S9 345 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 C1orf174Q8IYL3 243 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM256Q8N2U0 113 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 PNKDQ8N490 385 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 C17orf78Q8N4C9 275 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF738Q8NE65 137 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 Q8NFD4 153 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 SLC24A4Q8NFF2 622 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 OR5T1Q8NG75 326 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 OR2M3Q8NG83 312 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 OR10P1Q8NGE3 313 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 OR56B2PQ8NGI1 322 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 OR10V1Q8NGI7 309 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 OR10G8Q8NGN5 311 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 OR1F12Q8NHA8 337 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 SGMS2Q8NHU3 365 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 MRGPRDQ8TDS7 321 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 VN1R17PQ8TDU5 208 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 RNF138Q8WVD3 245 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.41□□□□□ -2.02
SLIRP-208ENST00000556956 DYRK2Q92630 601 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 CORO2AQ92828 525 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 NAT6Q93015 286 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 NABP1Q96AH0 204 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 CLDN23Q96B33 292 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 SDSLQ96GA7 329 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 SFRP2Q96HF1 295 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 CYYR1Q96J86 154 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 RNF2Q99496 336 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 TXN2Q99757 166 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 ELOVL1Q9BW60 279 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 RBM24Q9BX46 236 aaKnown RBP2.41□□□□□ -2.02
SLIRP-208ENST00000556956 PLA2G2FQ9BZM2 168 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 ULBP2Q9BZM5 246 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 VSIRQ9H7M9 311 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 METTL7AQ9H8H3 244 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 SLC35D1Q9NTN3 355 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 LIN7CQ9NUP9 197 aaKnown RBP2.41□□□□□ -2.02
SLIRP-208ENST00000556956 IL36BQ9NZH7 164 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 HSPB7Q9UBY9 170 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 LAMTOR2Q9Y2Q5 125 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 MRPS16Q9Y3D3 137 aaKnown RBP2.41□□□□□ -2.02
SLIRP-208ENST00000556956 PAM16Q9Y3D7 125 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 OR2W1Q9Y3N9 320 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 LY96Q9Y6Y9 160 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 TET1Q8NFU7 2136 aa2.41□□□□□ -2.02
SLIRP-208ENST00000556956 PIKFYVEQ9Y2I7 2098 aa2.4□□□□□ -2.02
SLIRP-208ENST00000556956 TCF20Q9UGU0 1960 aaKnown RBP2.4□□□□□ -2.02
SLIRP-208ENST00000556956 IGKV1-27A0A075B6S5 117 aa2.4□□□□□ -2.03
SLIRP-208ENST00000556956 TRAV30A0A087WSZ9 112 aa2.4□□□□□ -2.03
SLIRP-208ENST00000556956 IGKV1D-13A0A0B4J2D9 117 aa2.4□□□□□ -2.03
SLIRP-208ENST00000556956 IGHV5-51A0A0C4DH38 117 aa2.4□□□□□ -2.03
SLIRP-208ENST00000556956 A0A0G2JRQ6 117 aa2.4□□□□□ -2.03
SLIRP-208ENST00000556956 UBE2L5PA0A1B0GUS4 154 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms