RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 C8orf88P0DMB2 117 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 CD40LGP29965 261 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 PEBP1P30086 187 aaKnown RBP0.94□□□□□ -2.26
SCFD1-218ENST00000556256 CTBP2P56545 445 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 FKBP1AP62942 108 aaKnown RBP0.94□□□□□ -2.26
SCFD1-218ENST00000556256 LHFPL1Q86WI0 220 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 OR4X2Q8NGF9 303 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 HAVCR2Q8TDQ0 301 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 CMTM5Q96DZ9 223 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 ZNF625Q96I27 306 aaPredicted RBP0.94□□□□□ -2.26
SCFD1-218ENST00000556256 TMEM109Q9BVC6 243 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 TIMM21Q9BVV7 248 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 TMEM222Q9H0R3 208 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 HDHD2Q9H0R4 259 aa0.94□□□□□ -2.26
SCFD1-218ENST00000556256 POLR3HQ9Y535 204 aaPredicted RBP0.94□□□□□ -2.26
SCFD1-218ENST00000556256 REREQ9P2R6 1566 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 ZNF705FA8MVS1 300 aaPredicted RBP0.93□□□□□ -2.26
SCFD1-218ENST00000556256 BHLHE40O14503 412 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 CETN3O15182 167 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 APOMO95445 188 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 NPYP01303 97 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 UCHL1P09936 223 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 DDTP30046 118 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 RPL27AP46776 148 aaKnown RBP0.93□□□□□ -2.26
SCFD1-218ENST00000556256 GABRA2P47869 451 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 IDH3GP51553 393 aaPredicted RBP0.93□□□□□ -2.26
SCFD1-218ENST00000556256 MAP3K7CLP57077 242 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 TBPL1P62380 186 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 UAP1Q16222 522 aaPredicted RBP0.93□□□□□ -2.26
SCFD1-218ENST00000556256 ZNF791Q3KP31 576 aaPredicted RBP0.93□□□□□ -2.26
SCFD1-218ENST00000556256 SLC36A2Q495M3 483 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 PABPC1L2AQ5JQF8 200 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 SBSNQ6UWP8 590 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 NAA40Q86UY6 237 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 FAM9CQ8IZT9 166 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 PACRGLQ8N7B6 248 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 TMEM161BQ8NDZ6 487 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 LHFPL5Q8TAF8 219 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 EEF1AKMT1Q8WVE0 214 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 DSCAMO60469 2012 aa0.93□□□□□ -2.26
SCFD1-218ENST00000556256 ZNF532Q9HCE3 1301 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 AHNAK2Q8IVF2 5795 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 ARHGAP32A7KAX9 2087 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 MPDZO75970 2070 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 TMSB15BA0A087X1C1 80 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 TRAV41A0A0B4J266 112 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 KRT75O95678 551 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 HLA-DQB2P05538 268 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 IL3P08700 152 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 COX5BP10606 129 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 MLLT11Q13015 90 aaPredicted RBP0.92□□□□□ -2.26
SCFD1-218ENST00000556256 HSP90B2PQ58FF3 399 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 SAPCD1Q5SSQ6 148 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 C1orf194Q5T5A4 169 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 N4BP2L1Q5TBK1 243 aaPredicted RBP0.92□□□□□ -2.26
SCFD1-218ENST00000556256 OR10K2Q6IF99 312 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 TNFAIP8L2Q6P589 184 aaPredicted RBP0.92□□□□□ -2.26
SCFD1-218ENST00000556256 FAM151BQ6UXP7 276 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 Q6ZS52 159 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 OR5J2Q8NH18 312 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 JOSD2Q8TAC2 188 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 ZNF675Q8TD23 568 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 ANKRD36BP1Q96IX9 119 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 CCL13Q99616 98 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 HHLA3Q9XRX5 114 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 ATP6V1DQ9Y5K8 247 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 KDM5BQ9UGL1 1544 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 GBF1Q92538 1859 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 HELZ2Q9BYK8 2649 aaKnown RBP0.92□□□□□ -2.26
SCFD1-218ENST00000556256 KIF15Q9NS87 1388 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 DENND4BO75064 1496 aaPredicted RBP0.92□□□□□ -2.26
SCFD1-218ENST00000556256 SLX4Q8IY92 1834 aa0.92□□□□□ -2.26
SCFD1-218ENST00000556256 IGHV3-64A0A075B6Q5 118 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 A0A0A6YYH2 397 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 A0A1B0GW54 56 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 A6NJ64 397 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 J3QQQ9 107 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 TYMSP04818 313 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 REG1AP05451 166 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 BPGMP07738 259 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 CCL5P13501 91 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 CCL1P22362 96 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 CDC34P49427 236 aaPredicted RBP0.91□□□□□ -2.26
SCFD1-218ENST00000556256 HINT1P49773 126 aaPredicted RBP0.91□□□□□ -2.26
SCFD1-218ENST00000556256 CDK9P50750 372 aaKnown RBP0.91□□□□□ -2.26
SCFD1-218ENST00000556256 RPL26P61254 145 aaKnown RBP0.91□□□□□ -2.26
SCFD1-218ENST00000556256 GNA12Q03113 381 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 RELAQ04206 551 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 PPP1R1AQ13522 171 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 MIAQ16674 131 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 CST9Q5W186 159 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 SLC35E3Q7Z769 313 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 UBL4BQ8N7F7 174 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 SGMS2Q8NHU3 365 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 GNPNAT1Q96EK6 184 aaPredicted RBP0.91□□□□□ -2.26
SCFD1-218ENST00000556256 NMNAT3Q96T66 252 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 TTTY13Q9BZ97 58 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 MAP1LC3AQ9H492 121 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 HRASLSQ9HDD0 168 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 DKKL1Q9UK85 242 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms