RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ZNF107Q9UII5 783 aaPredicted RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 RPH3ALQ9UNE2 315 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 GSTK1Q9Y2Q3 226 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 CAB39Q9Y376 341 aaPredicted RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 NOP16Q9Y3C1 178 aaKnown RBP1.72□□□□□ -2.13
CPSF6-207ENST00000551516 LINC00312Q9Y6C7 94 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 TNCP24821 2201 aa1.72□□□□□ -2.13
CPSF6-207ENST00000551516 SRRM2Q9UQ35 2752 aaKnown RBP1.71□□□□□ -2.14
CPSF6-207ENST00000551516 IGHV7-81A0A0B4J1V7 117 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 KBTBD11-OT1A0A1B0GTJ5 212 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 RBMY1BA6NDE4 496 aaKnown RBP1.71□□□□□ -2.14
CPSF6-207ENST00000551516 ARRDC5A6NEK1 342 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 RBMY1EA6NEQ0 496 aaKnown RBP1.71□□□□□ -2.14
CPSF6-207ENST00000551516 GGT3PA6NGU5 568 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 OR5B21A6NL26 309 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 OOSP1A8MZH6 123 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 E9PLD3 99 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 SLC17A2O00624 439 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 XKRYO14609 159 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 DHRS3O75911 302 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 NDUFA3O95167 84 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 BRI3O95415 125 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 NRASP01111 189 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 IFNA14P01570 189 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 ARG1P05089 322 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 RBMY1DP0C7P1 496 aaKnown RBP1.71□□□□□ -2.14
CPSF6-207ENST00000551516 CT45A10P0DMU9 189 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 COX4I1P13073 169 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 SPNP16150 400 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 ATP6V1B2P21281 511 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 CALB2P22676 271 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 CFL1P23528 166 aaKnown RBP1.71□□□□□ -2.14
CPSF6-207ENST00000551516 HTR1DP28221 377 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 RRM2P31350 389 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 KIR3DL2P43630 455 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 VDAC2P45880 294 aaPredicted RBP1.71□□□□□ -2.14
CPSF6-207ENST00000551516 HAAOP46952 286 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 ALDH3B2P48448 385 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 PPT1P50897 306 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 IFFO1Q0D2I5 559 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 RIPPLY1Q0D2K3 151 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF816Q0VGE8 651 aaPredicted RBP1.71□□□□□ -2.14
CPSF6-207ENST00000551516 SLC22A6Q4U2R8 563 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 ELP2Q6IA86 826 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 GLYATQ6IB77 296 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 FAHD1Q6P587 224 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 C2orf66Q6UXQ4 117 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 CYP4Z1Q86W10 505 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 TGIF2LXQ8IUE1 241 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF695Q8IW36 515 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 HS3ST5Q8IZT8 346 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 MTURNQ8N3F0 131 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 DRAM1Q8N682 238 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 STXBP6Q8NFX7 210 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 OR51T1Q8NGJ9 327 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 OR2T4Q8NH00 348 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 OR10AC1Q8NH08 325 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 RHOXF1Q8NHV9 184 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 PLPPR1Q8TBJ4 325 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 FANK1Q8TC84 345 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 OR51E1Q8TCB6 317 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 GNPDA2Q8TDQ7 276 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 C4orf3Q8WVX3 66 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 DCUN1D4Q92564 292 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 SPTSSAQ969W0 71 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 ADAT3Q96EY9 351 aaPredicted RBP1.71□□□□□ -2.14
CPSF6-207ENST00000551516 PYURFQ96I23 114 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 TPD52L3Q96J77 140 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 MBOAT4Q96T53 435 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 SH3GL1Q99961 368 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 HOPXQ9BPY8 73 aaPredicted RBP1.71□□□□□ -2.14
CPSF6-207ENST00000551516 SIKE1Q9BRV8 207 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 AGMATQ9BSE5 352 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 OSBPL10Q9BXB5 764 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 YIPF3Q9GZM5 350 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 CHST5Q9GZS9 411 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 PBOV1Q9GZY1 135 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 TOLLIPQ9H0E2 274 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 HMG20AQ9NP66 347 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 GPR84Q9NQS5 396 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 FGFR1OP2Q9NVK5 253 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 ARMC1Q9NVT9 282 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 RBFOX1Q9NWB1 397 aaKnown RBP1.71□□□□□ -2.14
CPSF6-207ENST00000551516 TAS2R1Q9NYW7 299 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 SIGLEC8Q9NYZ4 499 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 GNG12Q9UBI6 72 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 EXTL2Q9UBQ6 330 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 LINC00527Q9UJ94 153 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 PSG11Q9UQ72 335 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 SLC22A13Q9Y226 551 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF256Q9Y2P7 627 aaPredicted RBP1.71□□□□□ -2.14
CPSF6-207ENST00000551516 HILPDAQ9Y5L2 63 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 NUBP2Q9Y5Y2 271 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 VPS13BQ7Z7G8 4022 aa1.71□□□□□ -2.14
CPSF6-207ENST00000551516 A0A1B0GW64 132 aa1.7□□□□□ -2.14
CPSF6-207ENST00000551516 ODAMA1E959 279 aa1.7□□□□□ -2.14
CPSF6-207ENST00000551516 PSMB11A5LHX3 300 aa1.7□□□□□ -2.14
CPSF6-207ENST00000551516 IZUMO1RA6ND01 250 aa1.7□□□□□ -2.14
CPSF6-207ENST00000551516 A6NIN4 97 aa1.7□□□□□ -2.14
CPSF6-207ENST00000551516 PCP4L1A6NKN8 68 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms