RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 RPEL1Q2QD12 228 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 RCHY1Q96PM5 261 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 C19orf25Q9UFG5 118 aaPredicted RBP10.22□□□□□ -0.77
VDR-208ENST00000550325 MLNRO43193 412 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 GPX1P07203 203 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 IGLC2P0DOY2 106 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 IGLC3P0DOY3 106 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 RELBQ01201 579 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 ZNF585BQ52M93 769 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 ASPHD1Q5U4P2 390 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 FAM53AQ6NSI3 398 aaPredicted RBP10.22□□□□□ -0.77
VDR-208ENST00000550325 MRPL52Q86TS9 123 aaKnown RBP10.22□□□□□ -0.77
VDR-208ENST00000550325 MMD2Q8IY49 270 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 NFAM1Q8NET5 270 aaPredicted RBP10.22□□□□□ -0.77
VDR-208ENST00000550325 LOXL4Q96JB6 756 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 SLC35D1Q9NTN3 355 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 IL36GQ9NZH8 169 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 SLC45A2Q9UMX9 530 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 H0Y8G0 127 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 LINC00205P59089 165 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 SRYQ05066 204 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 ZIC4Q8N9L1 334 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 LSM10Q969L4 123 aaKnown RBP10.22□□□□□ -0.77
VDR-208ENST00000550325 TP73-AS1Q9UF72 201 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 SCRG1O75711 98 aa10.21□□□□□ -0.77
VDR-208ENST00000550325 ACTL6BO94805 426 aa10.21□□□□□ -0.77
VDR-208ENST00000550325 VAMP5O95183 116 aa10.21□□□□□ -0.77
VDR-208ENST00000550325 CCL3P10147 92 aa10.21□□□□□ -0.77
VDR-208ENST00000550325 HYAL1Q12794 435 aa10.21□□□□□ -0.77
VDR-208ENST00000550325 DAZAP2Q15038 168 aaPredicted RBP10.21□□□□□ -0.77
VDR-208ENST00000550325 STUMQ69YW2 141 aa10.21□□□□□ -0.77
VDR-208ENST00000550325 H2BFWTQ7Z2G1 175 aa10.21□□□□□ -0.77
VDR-208ENST00000550325 VASH2Q86V25 355 aa10.21□□□□□ -0.77
VDR-208ENST00000550325 OR2D2Q9H210 308 aa10.21□□□□□ -0.77
VDR-208ENST00000550325 CLCF1Q9UBD9 225 aa10.21□□□□□ -0.77
VDR-208ENST00000550325 EML6Q6ZMW3 1958 aa10.21□□□□□ -0.77
VDR-208ENST00000550325 C3orf79P0CE67 100 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 NTF4P34130 210 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 SPATA46Q5T0L3 261 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 DRAM1Q8N682 238 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 ZNF439Q8NDP4 499 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 ORAOV1Q8WV07 137 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 TIMM9Q9Y5J7 89 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 FER1L5A0AVI2 2057 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 RPL31P62899 125 aaKnown RBP10.21□□□□□ -0.78
VDR-208ENST00000550325 MIC13Q5XKP0 118 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 TMEM42Q69YG0 159 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 DOLPP1Q86YN1 238 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 AKIRIN1Q9H9L7 192 aaPredicted RBP10.21□□□□□ -0.78
VDR-208ENST00000550325 COX11Q9Y6N1 276 aa10.21□□□□□ -0.78
VDR-208ENST00000550325 ODAMA1E959 279 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 S1PR2O95136 353 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 NXPH2O95156 264 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 RAC2P15153 192 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 COMPP49747 757 aaPredicted RBP10.2□□□□□ -0.78
VDR-208ENST00000550325 MRPS21P82921 87 aaKnown RBP10.2□□□□□ -0.78
VDR-208ENST00000550325 SLC25A53Q5H9E4 307 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 TMEM14EPQ6UXP3 125 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 IL36BQ9NZH7 164 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 PIGBOS1A0A0B4J2F0 54 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 GFRA1P56159 465 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 SMIM15Q7Z3B0 74 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 KCNIP2Q9NS61 270 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.2□□□□□ -0.78
VDR-208ENST00000550325 ITGB1BP1O14713 200 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 TSPOP30536 169 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 DUSP3P51452 185 aaPredicted RBP10.2□□□□□ -0.78
VDR-208ENST00000550325 YPEL3P61236 119 aaPredicted RBP10.2□□□□□ -0.78
VDR-208ENST00000550325 RNASE7Q9H1E1 156 aaKnown RBP10.2□□□□□ -0.78
VDR-208ENST00000550325 DLL3Q9NYJ7 618 aa10.2□□□□□ -0.78
VDR-208ENST00000550325 CELSR3Q9NYQ7 3312 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 DEFB108AA8MXU0 73 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 RHBDL1O75783 438 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 CLDN14O95500 239 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 CD99P14209 185 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 CDKN1BP46527 198 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 ACSF3Q4G176 576 aaPredicted RBP10.19□□□□□ -0.78
VDR-208ENST00000550325 OR4A47Q6IF82 309 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 SPOCK3Q9BQ16 436 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 WASHC3Q9Y3C0 194 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 ARL2-SNX15V9GYD0 113 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 TRAV24A0A0B4J272 114 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 HSBP1O75506 76 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 NGFP01138 241 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 GLB1P16278 677 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 TNFSF4P23510 183 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 PCBD1P61457 104 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 MMP17Q9ULZ9 603 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 ATG2AQ2TAZ0 1938 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 CD1BP29016 333 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 ZNF83P51522 516 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 RPL19P84098 196 aaKnown RBP10.19□□□□□ -0.78
VDR-208ENST00000550325 RNASEKQ6P5S7 137 aaKnown RBP10.19□□□□□ -0.78
VDR-208ENST00000550325 ABHD3Q8WU67 409 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 HINT2Q9BX68 163 aa10.19□□□□□ -0.78
VDR-208ENST00000550325 HEYLQ9NQ87 328 aaPredicted RBP10.19□□□□□ -0.78
VDR-208ENST00000550325 IGHV3-43A0A0B4J1X8 118 aa10.18□□□□□ -0.78
VDR-208ENST00000550325 A0A1W2PS18 150 aa10.18□□□□□ -0.78
VDR-208ENST00000550325 IGHV3-43DP0DP04 118 aa10.18□□□□□ -0.78
VDR-208ENST00000550325 BPIFB3P59826 476 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms