RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 ERVK-16P61578 105 aa14.05□□□□□ -0.16
LETMD1-220ENST00000549686 FCN2Q15485 313 aa14.05□□□□□ -0.16
LETMD1-220ENST00000549686 OR2B11Q5JQS5 317 aa14.05□□□□□ -0.16
LETMD1-220ENST00000549686 LDLRAD2Q5SZI1 272 aa14.05□□□□□ -0.16
LETMD1-220ENST00000549686 FAM219AQ8IW50 185 aa14.05□□□□□ -0.16
LETMD1-220ENST00000549686 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
LETMD1-220ENST00000549686 OR4C13Q8NGP0 309 aa14.05□□□□□ -0.16
LETMD1-220ENST00000549686 OR5M8Q8NGP6 311 aa14.05□□□□□ -0.16
LETMD1-220ENST00000549686 LHFPL5Q8TAF8 219 aa14.05□□□□□ -0.16
LETMD1-220ENST00000549686 LSM10Q969L4 123 aaKnown RBP14.05□□□□□ -0.16
LETMD1-220ENST00000549686 FLYWCH2Q96CP2 140 aaKnown RBP14.05□□□□□ -0.16
LETMD1-220ENST00000549686 RRNAD1Q96FB5 475 aaKnown RBP14.05□□□□□ -0.16
LETMD1-220ENST00000549686 RNF5Q99942 180 aa14.05□□□□□ -0.16
LETMD1-220ENST00000549686 HILPDAQ9Y5L2 63 aa14.05□□□□□ -0.16
LETMD1-220ENST00000549686 VPS13CQ709C8 3753 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 GOSR2O14653 212 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 CRYZL1O95825 349 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 AVPP01185 164 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 FSHBP01225 129 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 IGHV4-38-2P0DP08 117 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 NQO2P16083 231 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 BRS3P32247 399 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 LINC00205P59089 165 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 SSX2Q16385 188 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 TMEM177Q53S58 311 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 KLF17Q5JT82 389 aaPredicted RBP14.04□□□□□ -0.16
LETMD1-220ENST00000549686 SLC35G3Q8N808 338 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 SPIN2AQ99865 258 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 SPIN2BQ9BPZ2 258 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 PRR13Q9NZ81 148 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 NUP50Q9UKX7 468 aa14.04□□□□□ -0.16
LETMD1-220ENST00000549686 TIMM23O14925 209 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 S1PR2O95136 353 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 HOXB5P09067 269 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 SLC25A6P12236 298 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 FOSL1P15407 271 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 LGALS7P47929 136 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 AKR1C2P52895 323 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 CYCSP99999 105 aaKnown RBP14.03□□□□□ -0.16
LETMD1-220ENST00000549686 POU2AF1Q16633 256 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 GGNBP1Q5YKI7 109 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 GSG1LQ6UXU4 331 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 LYZL2Q7Z4W2 148 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 OR11H7Q8NGC8 314 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 RNASE11Q8TAA1 199 aaKnown RBP14.03□□□□□ -0.16
LETMD1-220ENST00000549686 AJUBAQ96IF1 538 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 FAM96BQ9Y3D0 163 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 CSMD1Q96PZ7 3565 aa14.03□□□□□ -0.16
LETMD1-220ENST00000549686 FAM90A9PA6NNJ1 464 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 A8MV72 311 aaPredicted RBP14.02□□□□□ -0.17
LETMD1-220ENST00000549686 IGKV1-39P01597 117 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 IGKV1D-39P04432 117 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 FBP1P09467 338 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 DYNLT3P51808 116 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 AANATQ16613 207 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 RUSC1-AS1Q66K80 236 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 C9orf139Q6ZV77 190 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 AKAP14Q86UN6 197 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 THNSL2Q86YJ6 484 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 CFHR4Q92496 578 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 R3HDM4Q96D70 268 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 SEC22AQ96IW7 307 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 ZNF436Q9C0F3 470 aaPredicted RBP14.02□□□□□ -0.17
LETMD1-220ENST00000549686 MEGF9Q9H1U4 602 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 MMP24Q9Y5R2 645 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 BAHCC1Q9P281 2608 aa14.02□□□□□ -0.17
LETMD1-220ENST00000549686 ITPR3Q14573 2671 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 IGHV3OR16-10A0A075B7F0 116 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 C5orf51A6NDU8 294 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 MARCH11A6NNE9 402 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 SHOXO15266 292 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 ADAP1O75689 374 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 IGKV1-16P04430 117 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 GIPP09681 153 aaPredicted RBP14.01□□□□□ -0.17
LETMD1-220ENST00000549686 CXCL3P19876 107 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 KRTAP1-1Q07627 177 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 SRSF4Q08170 494 aaKnown RBP14.01□□□□□ -0.17
LETMD1-220ENST00000549686 NMSQ5H8A3 153 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 THOC7Q6I9Y2 204 aaKnown RBP14.01□□□□□ -0.17
LETMD1-220ENST00000549686 BRD3OSQ6XYD6 125 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 HARBI1Q96MB7 349 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 MS4A7Q9GZW8 240 aaPredicted RBP14.01□□□□□ -0.17
LETMD1-220ENST00000549686 TMEM160Q9NX00 188 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 CACFD1Q9UGQ2 172 aa14.01□□□□□ -0.17
LETMD1-220ENST00000549686 FLNBO75369 2602 aaKnown RBP14.01□□□□□ -0.17
LETMD1-220ENST00000549686 AKAP9Q99996 3911 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 A0A1B0GU03 582 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 C13orf42A0A1B0GVH6 325 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 FAM25EA8MYX2 175 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 PFDN1O60925 122 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 CCNKO75909 580 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 OR2A4O95047 310 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 VENTXO95231 258 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 KRASP01116 189 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 IGKV1-5P01602 117 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 FAM106CPP0CH98 169 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 HNF1AP20823 631 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 RPS16P62249 146 aaKnown RBP14□□□□□ -0.17
LETMD1-220ENST00000549686 EBI3Q14213 229 aa14□□□□□ -0.17
LETMD1-220ENST00000549686 C2orf68Q2NKX9 166 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms