RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 FOXH1O75593 365 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 SC5DO75845 299 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 AHSA1O95433 338 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 PTHP01270 115 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 LINC00032P0C843 101 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 LYNX1P0DP58 116 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 PRPS1L1P21108 318 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 PRTN3P24158 256 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 GLRXP35754 106 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 MAGEA12P43365 314 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 SLC35B1P78383 322 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 H3F3AP84243 136 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 C2orf54Q08AI8 447 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 TNXAQ16473 311 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 ARHGAP11BQ3KRB8 267 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 CCDC153Q494R4 210 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 ATP6AP1LQ52LC2 224 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 ZCCHC24Q8N2G6 241 aaKnown RBP2.39□□□□□ -2.03
PTCH1-216ENST00000548379 SIGLECL1Q8N7X8 197 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 OR5D16Q8NGK9 328 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 OR6K6Q8NGW6 343 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 OR6N1Q8NGY5 312 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 OR5AK3PQ8NH89 298 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 TMEM239Q8WW34 195 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 C22orf15Q8WYQ4 148 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 C11orf40Q8WZ69 217 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 POP5Q969H6 163 aaKnown RBP2.39□□□□□ -2.03
PTCH1-216ENST00000548379 CENPNQ96H22 339 aaPredicted RBP2.39□□□□□ -2.03
PTCH1-216ENST00000548379 NARS2Q96I59 477 aaKnown RBP2.39□□□□□ -2.03
PTCH1-216ENST00000548379 SLC35G5Q96KT7 338 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 OR7D2Q96RA2 312 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 CAMK2N2Q96S95 79 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 SDF2Q99470 211 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 TIMM17AQ99595 171 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 SAMD10Q9BYL1 202 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 ULBP2Q9BZM5 246 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 LINC00470Q9BZP3 86 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 TMEM216Q9P0N5 145 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 CLEC2DQ9UHP7 191 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 PRO0461Q9UI25 63 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 TMEM14AQ9Y6G1 99 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 PKDREJQ9NTG1 2253 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 NUP210LQ5VU65 1888 aa2.39□□□□□ -2.03
PTCH1-216ENST00000548379 IGHV2OR16-5A0A0B4J2B6 119 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 A0A0J9YXV3 536 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 RNASEK-C17orf49H0YIS7 233 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 AZIN1O14977 448 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 BET1O15155 118 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 RTL8CO15255 209 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 OR2T1O43869 369 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 UBL3O95164 117 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 FADS2O95864 444 aaKnown RBP2.38□□□□□ -2.03
PTCH1-216ENST00000548379 DBIP07108 87 aaKnown RBP2.38□□□□□ -2.03
PTCH1-216ENST00000548379 GUSBP08236 651 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 TFPTP0C1Z6 253 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 OR12D1P0DN82 309 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 NQO1P15559 274 aaKnown RBP2.38□□□□□ -2.03
PTCH1-216ENST00000548379 ZNF3P17036 446 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 FLNAP21333 2647 aaKnown RBP2.38□□□□□ -2.03
PTCH1-216ENST00000548379 COL8A2P25067 703 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 FOXA1P55317 472 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 KLF3P57682 345 aaPredicted RBP2.38□□□□□ -2.03
PTCH1-216ENST00000548379 DNAJB13P59910 316 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 CCL8P80075 99 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 CEACAM16Q2WEN9 425 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 LIN52Q52LA3 116 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 C5orf47Q569G3 176 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 TTMPQ5BVD1 217 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 C5orf46Q6UWT4 87 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 DPPA2Q7Z7J5 298 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 MDP1Q86V88 176 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 WDFY1Q8IWB7 410 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 H1FOOQ8IZA3 346 aaPredicted RBP2.38□□□□□ -2.03
PTCH1-216ENST00000548379 ARRDC1Q8N5I2 433 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 SPICQ8N5J4 248 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 ZDHHC22Q8N966 263 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 OR6Q1Q8NGQ2 317 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 OR8U1Q8NH10 309 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 SYNPRQ8TBG9 265 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 TWIST2Q8WVJ9 160 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 IFT81Q8WYA0 676 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 RGP1Q92546 391 aaPredicted RBP2.38□□□□□ -2.03
PTCH1-216ENST00000548379 CCL17Q92583 94 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 PTX4Q96A99 478 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 ROPN1LQ96C74 230 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 BCL2L14Q9BZR8 327 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 SLC19A3Q9BZV2 496 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 NDEL1Q9GZM8 345 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 OR51I1Q9H343 314 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 C1orf198Q9H425 327 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 OR2S2Q9NQN1 319 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 UBAP1Q9NZ09 502 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 CALML5Q9NZT1 146 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 TAAR3PQ9P1P4 343 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 SLC17A7Q9P2U7 560 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 OR5V1Q9UGF6 321 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 MRM2Q9UI43 246 aaKnown RBP2.38□□□□□ -2.03
PTCH1-216ENST00000548379 RFNGQ9Y644 331 aa2.38□□□□□ -2.03
PTCH1-216ENST00000548379 V9GYY5 206 aaPredicted RBP2.38□□□□□ -2.03
PTCH1-216ENST00000548379 JMJD1CQ15652 2540 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms