RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 GPN1Q9HCN4 374 aaPredicted RBP6.93□□□□□ -1.3
VPS29-203ENST00000546588 BIN3Q9NQY0 253 aa6.93□□□□□ -1.3
VPS29-203ENST00000546588 HIF1ANQ9NWT6 349 aa6.93□□□□□ -1.3
VPS29-203ENST00000546588 TRAPPC2LQ9UL33 140 aa6.93□□□□□ -1.3
VPS29-203ENST00000546588 OR2W1Q9Y3N9 320 aa6.93□□□□□ -1.3
VPS29-203ENST00000546588 FAM208BQ5VWN6 2430 aa6.93□□□□□ -1.3
VPS29-203ENST00000546588 ZNF462Q96JM2 2506 aa6.93□□□□□ -1.3
VPS29-203ENST00000546588 FLNCQ14315 2725 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 IGHV3OR15-7A0A075B7D8 119 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 CRYM-AS1A6NIL9 109 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 A8MXK9 166 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 CCSO14618 274 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 TRIAP1O43715 76 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 YPEL1O60688 119 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 OR2A4O95047 310 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 HBZP02008 142 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 GYPAP02724 150 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 ANXA7P20073 488 aaKnown RBP6.92□□□□□ -1.3
VPS29-203ENST00000546588 COL8A2P25067 703 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 RAB25P57735 213 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 GUK1Q16774 197 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 C17orf58Q2M2W7 97 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 LYG2Q86SG7 212 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 LY6G5BQ8NDX9 201 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 STOML3Q8TAV4 291 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 CCL17Q92583 94 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 GALMQ96C23 342 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 AKR1E2Q96JD6 320 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 PACRGQ96M98 296 aaPredicted RBP6.92□□□□□ -1.3
VPS29-203ENST00000546588 YPEL2Q96QA6 119 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 OR2A7Q96R45 310 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 PFDN5Q99471 154 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 AGMATQ9BSE5 352 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 LAMP3Q9UQV4 416 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 ROS1P08922 2347 aa6.92□□□□□ -1.3
VPS29-203ENST00000546588 MEIKINA0A087WXM9 373 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 IGKV1D-13A0A0B4J2D9 117 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 KBTBD11-OT1A0A1B0GTJ5 212 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 A0A1B0GW55 424 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 hADV38S2A0JD32 116 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 C9orf170A2RU37 121 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 J3QKU1 62 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 K7EQM0 130 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 SLC22A5O76082 557 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 SFT2D2O95562 160 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 HLA-AP01891 365 aaKnown RBP6.91□□□□□ -1.3
VPS29-203ENST00000546588 TFF1P04155 84 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 DUX4L2P0CJ85 424 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 DUX4L3P0CJ86 424 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 DUX4L4P0CJ87 422 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 DUX4L5P0CJ88 424 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 DUX4L6P0CJ89 424 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 DUX4L7P0CJ90 424 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 IGKV1-13P0DP09 117 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 DAOP14920 347 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 AREGP15514 252 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 AADACP22760 399 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 GNRHRP30968 328 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 SSTR5P35346 364 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 DLX6P56179 175 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 PPP1R1AQ13522 171 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 DUX4L9Q6RFH8 374 aaPredicted RBP6.91□□□□□ -1.3
VPS29-203ENST00000546588 HEPN1Q6WQI6 88 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 ZNF767PQ75MW2 155 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 TCTEX1D1Q8N7M0 179 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 SYT8Q8NBV8 401 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 ZNF439Q8NDP4 499 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 OR2AK2Q8NG84 335 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 OR11H7Q8NGC8 314 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 DCTN5Q9BTE1 182 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 SUCNR1Q9BXA5 334 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 HIPK2Q9H2X6 1198 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 SLC2A9Q9NRM0 540 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 KCNIP1Q9NZI2 227 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 DUX4Q9UBX2 424 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 SLC25A10Q9UBX3 287 aaPredicted RBP6.91□□□□□ -1.3
VPS29-203ENST00000546588 CLN8Q9UBY8 286 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 MIOXQ9UGB7 285 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 ZFYVE26Q68DK2 2539 aa6.91□□□□□ -1.3
VPS29-203ENST00000546588 PIGBOS1A0A0B4J2F0 54 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 DUXBA0A1W2PPF3 345 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 C17orf98A8MV24 154 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 VWC2LB2RUY7 222 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 G3V3Q6 166 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 GPR31O00270 319 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 SPINT2O43291 252 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 ZNF728P0DKX0 622 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 NFYAP23511 347 aaPredicted RBP6.9□□□□□ -1.3
VPS29-203ENST00000546588 DNASE1P24855 282 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 CD34P28906 385 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 RBMXP38159 391 aaKnown RBP6.9□□□□□ -1.3
VPS29-203ENST00000546588 HERV-K104P61576 105 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 C5orf64Q2M2E5 130 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 LRRC10Q5BKY1 277 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 PRAMEF5Q5TYX0 476 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 FAM71F2Q6NXP2 309 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 Q6ZRM9 215 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 C11orf42Q8N5U0 333 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 CCDC71LQ8N9Z2 235 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms