RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 M0R143 59 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 CDIPTO14735 213 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 HBZP02008 142 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 SPINK2P20155 84 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 CD1BP29016 333 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 SOX8P57073 446 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 SELENOTP62341 195 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 PLGLB1Q02325 96 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 TLE1Q04724 770 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 SPATA46Q5T0L3 261 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 TEX38Q6PEX7 206 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 BTNL3Q6UXE8 466 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 ZNF808Q8N4W9 903 aaPredicted RBP7.32□□□□□ -1.24
TDP1-204ENST00000545686 TMEM251Q8N6I4 163 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 A0A1W2PPV4 95 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 MARCH11A6NNE9 402 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 FAM166BA8MTA8 275 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 M0QZK8 103 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 PSPNO60542 156 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 NDUFB4O95168 129 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 SCGB1D1O95968 90 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 ESDP10768 282 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 CD82P27701 267 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 ATP5G3P48201 142 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 TRAT1Q6PIZ9 186 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 TIPARPQ7Z3E1 657 aaKnown RBP7.31□□□□□ -1.24
TDP1-204ENST00000545686 TMEM204Q9BSN7 226 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 SNHG12Q9BXW3 62 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 WASF3Q9UPY6 502 aa7.31□□□□□ -1.24
TDP1-204ENST00000545686 POLR3KQ9Y2Y1 108 aaPredicted RBP7.31□□□□□ -1.24
TDP1-204ENST00000545686 RBMXL2O75526 392 aaKnown RBP7.3□□□□□ -1.24
TDP1-204ENST00000545686 TNFSF15O95150 251 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 CXorf1O96002 111 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 RAB4AP20338 218 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 TMPRSS3P57727 454 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 PAFAH1B2P68402 229 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 TRIP6Q15654 476 aaKnown RBP7.3□□□□□ -1.24
TDP1-204ENST00000545686 PDLIM3Q53GG5 364 aaPredicted RBP7.3□□□□□ -1.24
TDP1-204ENST00000545686 CST9LP1Q5W188 147 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 OR52L2PQ8NGH6 319 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 OR52E5Q8NH55 327 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 SGMS2Q8NHU3 365 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 ZCCHC14Q8WYQ9 949 aaKnown RBP7.3□□□□□ -1.24
TDP1-204ENST00000545686 MS4A10Q96PG2 267 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 OR2J1Q9GZK6 312 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 LOXL2Q9Y4K0 774 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.3□□□□□ -1.24
TDP1-204ENST00000545686 CRYAAP02489 173 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 STAG3L2P0CL84 134 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 STAG3L3P0CL85 134 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 KITLGP21583 273 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 ACP1P24666 158 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 TIMP3P35625 211 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 PRSS8Q16651 343 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 CMTM2Q8TAZ6 248 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 R3HDM4Q96D70 268 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 COQ2Q96H96 371 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 HES7Q9BYE0 225 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 LY96Q9Y6Y9 160 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 CACNA1DQ01668 2161 aa7.3□□□□□ -1.24
TDP1-204ENST00000545686 YLPM1P49750 1951 aaKnown RBP7.3□□□□□ -1.24
TDP1-204ENST00000545686 TRAV38-1A0A0B4J264 116 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 IFNL4K9M1U5 179 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 ADH4P08319 380 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 C1QTNF9P0C862 333 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 GCH1P30793 250 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 PLA2G5P39877 138 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 TPPP2P59282 170 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 HTD2P86397 168 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 MYPOPQ86VE0 399 aaPredicted RBP7.29□□□□□ -1.24
TDP1-204ENST00000545686 OR5T1Q8NG75 326 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 C20orf144Q9BQM9 153 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 DERL1Q9BUN8 251 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 C12orf49Q9H741 205 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 KLF13Q9Y2Y9 288 aaPredicted RBP7.29□□□□□ -1.24
TDP1-204ENST00000545686 LINC00473A8K010 186 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 C9JCJ5 164 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 RBFOX2O43251 390 aaKnown RBP eCLIP7.29□□□□□ -1.24
TDP1-204ENST00000545686 GALR2O43603 387 aaPredicted RBP7.29□□□□□ -1.24
TDP1-204ENST00000545686 ARL14EPLP0DKL9 152 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 TDGF1P13385 188 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 ADMP35318 185 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 CEBPDP49716 269 aaPredicted RBP7.29□□□□□ -1.24
TDP1-204ENST00000545686 TDGF1P3P51864 188 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 UBE2G2P60604 165 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 ACP7Q6ZNF0 438 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 TMEM256Q8N2U0 113 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 OR10G8Q8NGN5 311 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 SLC25A40Q8TBP6 338 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 C11orf52Q96A22 123 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 QTRT1Q9BXR0 403 aaKnown RBP7.29□□□□□ -1.24
TDP1-204ENST00000545686 SPRY4Q9C004 299 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 CBLN4Q9NTU7 201 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 TMEM106BQ9NUM4 274 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 ARL2-SNX15V9GYD0 113 aa7.29□□□□□ -1.24
TDP1-204ENST00000545686 TRBV20OR9-2A0A075B6H5 130 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 TRBV9A0A0B4J1U6 114 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 PRSS46E5RG02 174 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 HPRT1P00492 218 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 GRPP07492 148 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms