RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CRIPAKQ8N1N5 446 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 OR2A7Q96R45 310 aa10.93□□□□□ -0.66
CHD4-211ENST00000544484 PTBP3O95758 552 aaKnown RBP10.92□□□□□ -0.66
CHD4-211ENST00000544484 CECR9P0C854 216 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 TNFRSF9Q07011 255 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 SAXO1Q8IYX7 474 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 DRAM1Q8N682 238 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 OR4C5Q8NGB2 326 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 SH3BGRL3Q9H299 93 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 PGPA6NDG6 321 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 UMODP07911 640 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 PTGDSP41222 190 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 DCAF16Q9NXF7 216 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 AUP1Q9Y679 476 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 NPIPB13A6NJU9 1138 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 FAM74A7A6NL05 159 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 NPIPB4C9JG80 1138 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 FCGR2BP31994 310 aaPredicted RBP10.92□□□□□ -0.66
CHD4-211ENST00000544484 HSPE1P61604 102 aaKnown RBP10.92□□□□□ -0.66
CHD4-211ENST00000544484 PNKDQ8N490 385 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 ABHD17AQ96GS6 310 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 SCNM1Q9BWG6 230 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 CHD5Q8TDI0 1954 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 DLL1O00548 723 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 NDUFA2O43678 99 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 NUBP1P53384 320 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 CALHM1Q8IU99 346 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 SGK494Q96LW2 274 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 TMEM191AQ9H0A3 160 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 CBY3A6NI87 242 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 J3QR89 54 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 C16orf92Q96LL3 132 aa10.92□□□□□ -0.66
CHD4-211ENST00000544484 LYRM2Q9NU23 88 aaPredicted RBP10.92□□□□□ -0.66
CHD4-211ENST00000544484 C9orf172C9J069 976 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 ISLRO14498 428 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 FAM3BP58499 235 aaPredicted RBP10.91□□□□□ -0.66
CHD4-211ENST00000544484 IMMP1LQ96LU5 166 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 TP53RKQ96S44 253 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 RTN4RQ9BZR6 473 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 SNCGO76070 127 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 RPL39P5Q59GN2 51 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 LOC105371242A0A075B767 164 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 JPT1Q9UK76 154 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 ELOA3CA0A087WX78 387 aaPredicted RBP10.91□□□□□ -0.66
CHD4-211ENST00000544484 ID1P41134 155 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 MEF2BQ02080 365 aaPredicted RBP10.91□□□□□ -0.66
CHD4-211ENST00000544484 SCGB1D4Q6XE38 83 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 MAP1LC3CQ9BXW4 147 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 LINC00470Q9BZP3 86 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 COX19Q49B96 90 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 PEAR1Q5VY43 1037 aaPredicted RBP10.91□□□□□ -0.66
CHD4-211ENST00000544484 MRPL14Q6P1L8 145 aaKnown RBP10.91□□□□□ -0.66
CHD4-211ENST00000544484 ZNF841Q6ZN19 808 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 TCF19Q9Y242 345 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 ANKRD36A6QL64 1941 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 ROS1P08922 2347 aa10.91□□□□□ -0.66
CHD4-211ENST00000544484 GREB1Q4ZG55 1949 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 CD81P60033 236 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 OR9G1Q8NH87 305 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 hCG_38984A0A1B0GV85 526 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 FHITP49789 147 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 TMEM187Q14656 261 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 RAB24Q969Q5 203 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 RARRES2Q99969 163 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 ZNF430Q9H8G1 570 aaPredicted RBP10.9□□□□□ -0.66
CHD4-211ENST00000544484 LOC390937A0A1W2PQ73 354 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 CORTO00230 105 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 MPDU1O75352 247 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 HSPB1P04792 205 aaKnown RBP10.9□□□□□ -0.66
CHD4-211ENST00000544484 ZNF883P0CG24 379 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 TNFSF10P50591 281 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 KLRB1Q12918 225 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 POM121Q96HA1 1249 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 HAX1O00165 279 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 TWIST1Q15672 202 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 WDFY1Q8IWB7 410 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 ZCCHC14Q8WYQ9 949 aaKnown RBP10.9□□□□□ -0.66
CHD4-211ENST00000544484 MIOXQ9UGB7 285 aa10.9□□□□□ -0.66
CHD4-211ENST00000544484 PSME4Q14997 1843 aa10.9□□□□□ -0.67
CHD4-211ENST00000544484 H0YL77 283 aa10.9□□□□□ -0.67
CHD4-211ENST00000544484 PPOXP50336 477 aa10.9□□□□□ -0.67
CHD4-211ENST00000544484 SELENOTP62341 195 aa10.9□□□□□ -0.67
CHD4-211ENST00000544484 TMEM78Q5T7P6 136 aa10.9□□□□□ -0.67
CHD4-211ENST00000544484 PATJQ8NI35 1801 aa10.9□□□□□ -0.67
CHD4-211ENST00000544484 NBASA2RRP1 2371 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 IGKV3D-15A0A087WSY6 115 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 A1L4Q6 167 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 IGKV3-15P01624 115 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 CELA3BP08861 270 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 TIMM23BQ5SRD1 257 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 MEGF10Q96KG7 1140 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 QTRT1Q9BXR0 403 aaKnown RBP10.89□□□□□ -0.67
CHD4-211ENST00000544484 LCTP09848 1927 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 PROB1E7EW31 1015 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 GLRXP35754 106 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 TM4SF20Q53R12 229 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 PUSL1Q8N0Z8 303 aaKnown RBP10.89□□□□□ -0.67
CHD4-211ENST00000544484 ZNF738Q8NE65 137 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 VN1R17PQ8TDU5 208 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 TMEM45BQ96B21 275 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms