RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 LAMB2P55268 1798 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 CRYBB3P26998 211 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 CCL8P80075 99 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 TMEM252Q8N6L7 170 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 TMEM222Q9H0R3 208 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 TMEM229AB2RXF0 380 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 NPIPB8E9PQR5 432 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 NPIPB9F8W1W9 429 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 NKX2-8O15522 239 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 NPIPB7O75200 414 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 ATP5LO75964 103 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 IGKV3-20P01619 116 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 PMS2CLQ68D20 193 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 OR51G1Q8NGK1 321 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 DERL1Q9BUN8 251 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 C19orf24Q9BVV8 132 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 SPCS1Q9Y6A9 102 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 TRAV8-4A0A0B4J246 113 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 IGHV1OR15-9A0A0B4J2B8 117 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 LIFP15018 202 aa8.97□□□□□ -0.97
PCDH9-204ENST00000544246 IGHV4-39P01824 125 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 ZNF688P0C7X2 276 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 CTAG1AP78358 180 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 SAPCD1Q5SSQ6 148 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 MSRB3Q8IXL7 192 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 TPRX1Q8N7U7 411 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 CALYQ9NYX4 217 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 TRPM7Q96QT4 1865 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 A0A1W2PP11 408 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 OR2H2O95918 312 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 CCL3P10147 92 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 FGF12P61328 243 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 KIAA1644Q3SXP7 199 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 NIT1Q86X76 327 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 UCN2Q96RP3 112 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 C1QL3Q5VWW1 255 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 GOLT1AQ6ZVE7 132 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 ANAPC13Q9BS18 74 aa8.96□□□□□ -0.97
PCDH9-204ENST00000544246 SSBP4Q9BWG4 385 aaPredicted RBP8.96□□□□□ -0.97
PCDH9-204ENST00000544246 TMEM50AO95807 157 aa8.96□□□□□ -0.98
PCDH9-204ENST00000544246 UCP2P55851 309 aa8.96□□□□□ -0.98
PCDH9-204ENST00000544246 PAX2Q02962 417 aa8.96□□□□□ -0.98
PCDH9-204ENST00000544246 DUX3Q96PT4 197 aa8.96□□□□□ -0.98
PCDH9-204ENST00000544246 GOLGA4Q13439 2230 aaKnown RBP8.96□□□□□ -0.98
PCDH9-204ENST00000544246 CITO14578 2027 aa8.96□□□□□ -0.98
PCDH9-204ENST00000544246 GRIFINA4D1Z8 144 aa8.96□□□□□ -0.98
PCDH9-204ENST00000544246 CD1AP06126 327 aa8.96□□□□□ -0.98
PCDH9-204ENST00000544246 MPV17P39210 176 aa8.96□□□□□ -0.98
PCDH9-204ENST00000544246 SELENOHQ8IZQ5 122 aaKnown RBP8.96□□□□□ -0.98
PCDH9-204ENST00000544246 C18orf15Q96N68 181 aa8.96□□□□□ -0.98
PCDH9-204ENST00000544246 TTTY12Q9BZ98 90 aa8.96□□□□□ -0.98
PCDH9-204ENST00000544246 TMEM74BQ9NUR3 256 aa8.96□□□□□ -0.98
PCDH9-204ENST00000544246 TRAV12-3A0A0B4J271 114 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 STARD6P59095 220 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 VAX1Q5SQQ9 334 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 TLNRD1Q9H1K6 362 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 OPN3Q9H1Y3 402 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-204ENST00000544246 CLDN16Q9Y5I7 305 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 DPRXA6NFQ7 191 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 NPIPB11E5RHQ5 1161 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 LINC01465Q8N7H1 131 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 ALX4Q9H161 411 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-204ENST00000544246 EDIL3O43854 480 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 GCM2O75603 506 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-204ENST00000544246 APOMO95445 188 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 HOXD4P09016 255 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-204ENST00000544246 CXCL2P19875 107 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 ZNF600Q6ZNG1 722 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 MARVELD3Q96A59 401 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 TRIOBPQ9H2D6 2365 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 FAM90A26D6RGX4 464 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 NDUFA2O43678 99 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 PGLYRP1O75594 196 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-204ENST00000544246 ISG15P05161 165 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 REG1AP05451 166 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 CELA2BP08218 269 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-204ENST00000544246 CKS1BP61024 79 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 KIAA0040Q15053 153 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 SDHCQ99643 169 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-204ENST00000544246 PLA2G2FQ9BZM2 168 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 ELF5Q9UKW6 265 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-204ENST00000544246 SLC25A15Q9Y619 301 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 IGLV3-16A0A075B6K0 115 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 H0YL77 283 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 H3BTX0 84 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 CD69Q07108 199 aa8.95□□□□□ -0.98
PCDH9-204ENST00000544246 ECM29Q5VYK3 1845 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 UCNP55089 124 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 ISXQ2M1V0 245 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 VN1R4Q7Z5H5 301 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 SERGEFQ9UGK8 458 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 MRPS18BQ9Y676 258 aaKnown RBP8.94□□□□□ -0.98
PCDH9-204ENST00000544246 ADAMTS7Q9UKP4 1686 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 NDUFA3O95167 84 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 HOXB3P14651 431 aaPredicted RBP8.94□□□□□ -0.98
PCDH9-204ENST00000544246 HSPE1P61604 102 aaKnown RBP8.94□□□□□ -0.98
PCDH9-204ENST00000544246 GPR146Q96CH1 333 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 EIF3GO75821 320 aaKnown RBP eCLIP8.94□□□□□ -0.98
PCDH9-204ENST00000544246 CD300CQ08708 224 aa8.94□□□□□ -0.98
PCDH9-204ENST00000544246 ACSF3Q4G176 576 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms